Gene Paes_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0858 
Symbol 
ID6458769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp940234 
End bp941442 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content48% 
IMG OID642724862 
Productprotein of unknown function UPF0118 
Protein accessionYP_002015551 
Protein GI194333691 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.640782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.206541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAT CTGCAAGCAA CCGCAACCTG CTGGTTGCCG TCATAACAGC CGGAGCCCTT 
TTTCTGGGAT TTGAAGTCAG GGATGCGCTT TCCCCGCTTC TGGTTTACCT GATCCTGGTA
TTCCTTATTC AGCCCCTGCG CGACAATCAG TTTGTTGAAC GGTTGTTCTG GGGGTTGAAC
ATCCTTTTCG GGATATGGCT TTTTTCCGAG CTTTCAGGAC TCCTGACGCC GTTCATTATT
GCTTTGGTGC TTGCATTTCT CTTCGAGCCA CTGATGAACG GCCTGCTCAG ACTGAACATG
CCTCGCCTGC TTTCGGCTTT TCTCATAACC GTTTTCGGTG TAGGCGGTAT CGTGCTGATG
GTAGCGCTGC TCTCCCCTGA AATCGGCAGA CAGATGACCG CATTCGGCTC AATCGTTCCG
CTTATCCCGG ATTACCTGCA GGCATTTATC AACTGGATAT TCAGCTTTGA GATTTTTACG
TGGTTTTCGA TTGATGTCGA TGCGGTCAAA CAACATATCA TCCAGTCGAT CAACGAACAG
CTTGACAACA TAGGAATGCT GGCAAGCAAT TTCACGCAGA CCCTCTGGAA AAGCATTCCC
AAGGTGATCA CAACCATTAC GACAATCATT CTGCTGCCAT TTCTGACATT CTGGTTTCTC
AACGATTTCA ACCGTTTTTC AGATGCGATG GCCAGAATGC TGAATAAAAA GCCGGCATTG
TCGATACGGC GATATGTTCC TATGGCCAAA GATATTCTCA ATCAGTATAT CCGCGGGCAG
CTTATTGTCA TGATCATCGA GATAACGCTT TACTCCACTT TTTTTTCAAT TATCGGCATC
AACTACTCGC TCCTGCTCGG CATTCTTTCC GGGGCGGCTC TCTGGCTCCC CTACATCGGC
ATCTCGACGG CTATCGCTCT GACCTCACTG GTCATCTCTC TTGGAAGCAA CCCTATGGAG
CAGTTTGTAT GGGCAGGTCT GACCTACCTC TCAATCCAGG CGCTTGAAAT TCTTTTCATG
GTACCCAAAA TCGTAGGTGG CAAGGTTCAG CTTAACCCGA TCATCCTTTT CCTCTCCATT
TTCACCTTTG GCTACTTTTT CGGTATAGGA GGTATCCTGA TTTCTATTCC CGTGTCTGCA
TTCATTATTG CCCTTGTCAG GGAAAAACTC TACCAGGAAA AGAGCGAACG TCTTGATAAC
CCTGCTTAA
 
Protein sequence
MHQSASNRNL LVAVITAGAL FLGFEVRDAL SPLLVYLILV FLIQPLRDNQ FVERLFWGLN 
ILFGIWLFSE LSGLLTPFII ALVLAFLFEP LMNGLLRLNM PRLLSAFLIT VFGVGGIVLM
VALLSPEIGR QMTAFGSIVP LIPDYLQAFI NWIFSFEIFT WFSIDVDAVK QHIIQSINEQ
LDNIGMLASN FTQTLWKSIP KVITTITTII LLPFLTFWFL NDFNRFSDAM ARMLNKKPAL
SIRRYVPMAK DILNQYIRGQ LIVMIIEITL YSTFFSIIGI NYSLLLGILS GAALWLPYIG
ISTAIALTSL VISLGSNPME QFVWAGLTYL SIQALEILFM VPKIVGGKVQ LNPIILFLSI
FTFGYFFGIG GILISIPVSA FIIALVREKL YQEKSERLDN PA