Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0858 |
Symbol | |
ID | 6458769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 940234 |
End bp | 941442 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642724862 |
Product | protein of unknown function UPF0118 |
Protein accession | YP_002015551 |
Protein GI | 194333691 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.640782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.206541 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAAT CTGCAAGCAA CCGCAACCTG CTGGTTGCCG TCATAACAGC CGGAGCCCTT TTTCTGGGAT TTGAAGTCAG GGATGCGCTT TCCCCGCTTC TGGTTTACCT GATCCTGGTA TTCCTTATTC AGCCCCTGCG CGACAATCAG TTTGTTGAAC GGTTGTTCTG GGGGTTGAAC ATCCTTTTCG GGATATGGCT TTTTTCCGAG CTTTCAGGAC TCCTGACGCC GTTCATTATT GCTTTGGTGC TTGCATTTCT CTTCGAGCCA CTGATGAACG GCCTGCTCAG ACTGAACATG CCTCGCCTGC TTTCGGCTTT TCTCATAACC GTTTTCGGTG TAGGCGGTAT CGTGCTGATG GTAGCGCTGC TCTCCCCTGA AATCGGCAGA CAGATGACCG CATTCGGCTC AATCGTTCCG CTTATCCCGG ATTACCTGCA GGCATTTATC AACTGGATAT TCAGCTTTGA GATTTTTACG TGGTTTTCGA TTGATGTCGA TGCGGTCAAA CAACATATCA TCCAGTCGAT CAACGAACAG CTTGACAACA TAGGAATGCT GGCAAGCAAT TTCACGCAGA CCCTCTGGAA AAGCATTCCC AAGGTGATCA CAACCATTAC GACAATCATT CTGCTGCCAT TTCTGACATT CTGGTTTCTC AACGATTTCA ACCGTTTTTC AGATGCGATG GCCAGAATGC TGAATAAAAA GCCGGCATTG TCGATACGGC GATATGTTCC TATGGCCAAA GATATTCTCA ATCAGTATAT CCGCGGGCAG CTTATTGTCA TGATCATCGA GATAACGCTT TACTCCACTT TTTTTTCAAT TATCGGCATC AACTACTCGC TCCTGCTCGG CATTCTTTCC GGGGCGGCTC TCTGGCTCCC CTACATCGGC ATCTCGACGG CTATCGCTCT GACCTCACTG GTCATCTCTC TTGGAAGCAA CCCTATGGAG CAGTTTGTAT GGGCAGGTCT GACCTACCTC TCAATCCAGG CGCTTGAAAT TCTTTTCATG GTACCCAAAA TCGTAGGTGG CAAGGTTCAG CTTAACCCGA TCATCCTTTT CCTCTCCATT TTCACCTTTG GCTACTTTTT CGGTATAGGA GGTATCCTGA TTTCTATTCC CGTGTCTGCA TTCATTATTG CCCTTGTCAG GGAAAAACTC TACCAGGAAA AGAGCGAACG TCTTGATAAC CCTGCTTAA
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Protein sequence | MHQSASNRNL LVAVITAGAL FLGFEVRDAL SPLLVYLILV FLIQPLRDNQ FVERLFWGLN ILFGIWLFSE LSGLLTPFII ALVLAFLFEP LMNGLLRLNM PRLLSAFLIT VFGVGGIVLM VALLSPEIGR QMTAFGSIVP LIPDYLQAFI NWIFSFEIFT WFSIDVDAVK QHIIQSINEQ LDNIGMLASN FTQTLWKSIP KVITTITTII LLPFLTFWFL NDFNRFSDAM ARMLNKKPAL SIRRYVPMAK DILNQYIRGQ LIVMIIEITL YSTFFSIIGI NYSLLLGILS GAALWLPYIG ISTAIALTSL VISLGSNPME QFVWAGLTYL SIQALEILFM VPKIVGGKVQ LNPIILFLSI FTFGYFFGIG GILISIPVSA FIIALVREKL YQEKSERLDN PA
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