| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0852 |
|---|
| Symbol | |
|---|
| ID | 6459107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 933969 |
|---|
| End bp | 935504 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642724856 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| Protein accession | YP_002015545 |
|---|
| Protein GI | 194333685 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
|---|
| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00934682 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.437554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGC TGCCTTCTGG TGCTGAAATT CAGAATATCA TCGCTACGCT GAAGTCAGGT
GCGTTGCATT TTCTTCCGGA GATATACCTT TCAGCGCTTT TTCTGGTGTT GATCCTGCTG
GACCTTATTT TCAGGCCGAA AAAGCATTAT CTACTGTCTG TAACCGCCCT TGTCGGTCTG
GCAGGAAGCT TCTACTTCAT TTTCCGGCAG CATGCCATGA CTGGCAATGA GATCTTCTTT
GGCATGTATG CCATCGATGA ATTCTCTGTT TTCTTCAAGT ACTTCTTCGT CGCCTCTGGT
ATGCTTACCG TGATGATTTC GATGCCCTCC CTGGAGTTGA ATACCCGTGC ATCCGGGCTT
GGTGAATATT ACTCCCTGAT CATCGGTATG GTGATCGGTA TGGTGATGAT GGCATCAGCT
ACGGATCTCC TGATGATTTT TCTTTCCATG GAGCTTGTCA GTCTTGCTGC ATATGTGTTG
ACCGGCTATA TGAAGCGCGA ACAGCGTTCG ACTGAAGCAG CGTTGAAATA CATGATCTAC
GGAGCTGTTT CTTCAGGACT TATGATCTAT GGTTTTTCAA TCATTTACGG ATTGACCGGC
TCGACAAATA TCTCAGTGAT CAGCCAGGTG CTTATTGACA GAGGCTATGA TCCTCTTCTT
CTCATGATTG CTTCACTCAT GGTGCTTGTC GGTATAGGAT ACAAAATCGG CGCTGTACCG
TTCCACTTCT GGAGCCCCGA TGTTTACGAA GGCGCTCCTA TTCCTGTAAC TGCATTTCTT
TCAGTTGCAT CGAAAGCGGC CGGTTTTGCA CTTCTGATCC GATATTTCTA TGTCGCGGTG
CCTCATATCG GTGACCCCGG AGCATTTACG CCCGGCATGG ATTGGGTAAC CATGCTTATG
ATTCTCTCGG TCGCATCGAT GATTTACGGC AACGTTGTCG CTTTGTGGCA GAAAAACATC
AAGCGGCTTC TTGCGTATTC ATCCATTGCT CACGCAGGAT ATCTCCTGCT CGGCATTATC
GTCATGGACG AGCTTGGTAC GCAGGCAACA CTTTTTTATC TGGTATCCTA TCTCCTGATG
AACTTCGGGG CATTTCTTGT CGCTGTGATT ATTGCCAATA AAACCGGCAG CGAAAATATT
GATGATTATC GTGGTCTGGG CAGAAGAATG CCTCTTGCCG GTGCGGCTAT GACGGTTTTT
CTGATTTCAC TGGTCGGTCT TCCTCCCACA GTCGGCTTCA TTGGTAAACT GATGATTTTC
TCGGCGTTGC TGGCTAAGGG TTCTGTATTT ATCTGGCTGG CTCTTATCGG CATTCTTACC
AGTGTTATTT CGCTTTATTA CTATATGCTT ATACCGCTCA ATATGTATTT ACGTGAGTCA
AAGCAGCCAC TGCCTGATAC GATCAGTTCA GGTCTTCTGC CAGGAATAGT GACGGCAGGT
CTCATGATTC TGACGCTCTA TTTCGGTATT TTCTTTACTC CGCTGTCAGA CTTTGCCCGT
TATGCGATAA CTGTTTTTGG CAACCAGCTT TATTAG
|
|---|
| Protein sequence | MFELPSGAEI QNIIATLKSG ALHFLPEIYL SALFLVLILL DLIFRPKKHY LLSVTALVGL
AGSFYFIFRQ HAMTGNEIFF GMYAIDEFSV FFKYFFVASG MLTVMISMPS LELNTRASGL
GEYYSLIIGM VIGMVMMASA TDLLMIFLSM ELVSLAAYVL TGYMKREQRS TEAALKYMIY
GAVSSGLMIY GFSIIYGLTG STNISVISQV LIDRGYDPLL LMIASLMVLV GIGYKIGAVP
FHFWSPDVYE GAPIPVTAFL SVASKAAGFA LLIRYFYVAV PHIGDPGAFT PGMDWVTMLM
ILSVASMIYG NVVALWQKNI KRLLAYSSIA HAGYLLLGII VMDELGTQAT LFYLVSYLLM
NFGAFLVAVI IANKTGSENI DDYRGLGRRM PLAGAAMTVF LISLVGLPPT VGFIGKLMIF
SALLAKGSVF IWLALIGILT SVISLYYYML IPLNMYLRES KQPLPDTISS GLLPGIVTAG
LMILTLYFGI FFTPLSDFAR YAITVFGNQL Y
|
|---|
| |