| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0851 |
|---|
| Symbol | |
|---|
| ID | 6460805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 932227 |
|---|
| End bp | 933864 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642724855 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_002015544 |
|---|
| Protein GI | 194333684 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.157945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.412273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTT TAATTGTTTT TCTGCCTATC ATAGCCGGCC TGATCATTGT GGCAGTTCCT
TCTTCGCAAA AGCAGGTTAT CAGGCTTGTT TCACTTTTTG CCGCACTTGG ACAGTGTGTG
CTTGCGTACT TCATCTGGCA GGGTTATGAC CCATCAATGC CCGGCATTAT CGCTGGACCT
GGAGGTTCTC TCGACGGCTC TTTCCAGTTT GTCGAGCGTC TTCCCTGGAT TTCGCTTGAT
CTTGGAAATC TGGGATCGCT CAACATCGAG TATTTCCTCG GTGTCGACGG TCTGTCGATC
ACTATGATCA TCCTGACAGC TCTGATTTCA ACTATAGGAG TGTTGTCCAG CTGGACAATC
AAAAAGCAGA TCAAGGGCTA TTTCATTCTT TTCAACATCC TCAGCACAGC CATGATGGGA
TGTTTTGTCG CCCTCGACTT CTTTCTTTTC TACGTATTCT GGGAATTGAT GCTGCTTCCG
ATGTACTTCC TCATCGGTAT CTGGGGCGGA CCTAACCGTG AGTATGCAGC GATCAAGTTC
TTCCTGTATA CGCTCTTCGG TTCAGTCTTC ATGCTTCTGG TCATGATAGC CCTGTATTTC
AGCGTTATCG ATCCGGCTAC AGGAAACAAT ACGTTCAGTC TCGTGGCTAT GGCCAGCCAG
GAAAACTACA TCCCGGGTTC AATTCTGGGG CCTGAAAGCG TGACATGGCG CTACGTCGCA
TTTATCGTTC TCTTTATCGG TTTTGCTATC AAGGTTCCGA TGTTTCCTTT TCATACATGG
CTTCCCGATG CACACGTCGA AGCGCCGACC CCTATCTCTG TTATACTTGC AGGCGTTCTT
CTGAAGCTCG GTACCTATGG TATGATGCGT ATCAACTTTC CATTGTTCCC TGAAGTGTTT
CAGGCCTCAT TGTATGTCAT TGGCGTCTTT GGAGCGATCA ATATTATTTA CGGTGCTTTC
TGCGCACTTG CCCAGCAGGA TTTAAAGAAA CTGGTTGCAT ATTCTTCAAT CAGTCACATG
GGTTACGTGC TGCTCGGGCT TGCCGCAGCC AACACCGAAG GTATGACTGG CGCCCTCTAC
CAGATGTTCA ATCATGGGAC CATCACAGCC ATGCTTTTCC TTCTTGTCGG TGTTATCTAC
GACCGTGCGC ATACCCGCTC TATCGATAAG TTCGGAGGTC TGGCAACCTA TATGCCAGTG
TATGCCGGTG TTGTCACGAT TGCATGGTTC GCCTCGCTTG GTCTTCCTGG TCTGTCAGGA
TTCATTTCCG AGGCATTTGT CTTTGTCGGA GCTTTCAGCT CAGAGGTGAC ACGTAATATT
GCCATTGTTT CAGTCCTGGG TATCGTTTTT GGCGCAGCGT ATCTTCTCTG GTCCTTGCAG
CGTATGTTCC TCGGAAAACG TAATCCTGAT GCTGTCTATG AACTCCAGAC AGGAGATGAC
GGTCATGAAC ATATTCATTT TCACGACTGG ACCGGTAAAA ACGATCTTGA CGGCAGGGAA
TTGACCATGC TTGTTCCTCT TGCTCTTATT ATCATCATCC TCGGAGTTTA TCCGATGCCA
GTTCTCGGAT TGATGACGAC AAGCATCAAT AAGCTGGTCG AAGTGCTTTC ACCGGTTGTA
TTGACTGCTA TTAACTGA
|
|---|
| Protein sequence | MLSLIVFLPI IAGLIIVAVP SSQKQVIRLV SLFAALGQCV LAYFIWQGYD PSMPGIIAGP
GGSLDGSFQF VERLPWISLD LGNLGSLNIE YFLGVDGLSI TMIILTALIS TIGVLSSWTI
KKQIKGYFIL FNILSTAMMG CFVALDFFLF YVFWELMLLP MYFLIGIWGG PNREYAAIKF
FLYTLFGSVF MLLVMIALYF SVIDPATGNN TFSLVAMASQ ENYIPGSILG PESVTWRYVA
FIVLFIGFAI KVPMFPFHTW LPDAHVEAPT PISVILAGVL LKLGTYGMMR INFPLFPEVF
QASLYVIGVF GAINIIYGAF CALAQQDLKK LVAYSSISHM GYVLLGLAAA NTEGMTGALY
QMFNHGTITA MLFLLVGVIY DRAHTRSIDK FGGLATYMPV YAGVVTIAWF ASLGLPGLSG
FISEAFVFVG AFSSEVTRNI AIVSVLGIVF GAAYLLWSLQ RMFLGKRNPD AVYELQTGDD
GHEHIHFHDW TGKNDLDGRE LTMLVPLALI IIILGVYPMP VLGLMTTSIN KLVEVLSPVV
LTAIN
|
|---|
| |