Gene Paes_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0844 
Symbol 
ID6460435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp925468 
End bp925995 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content50% 
IMG OID642724848 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_002015537 
Protein GI194333677 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT CACAGGGAAC TATCGGCCAA TCTGCAGTAG TGGAGGCAAG CAGAGCGGCA 
TACGCGATCA TTCGTGAAAA GTTTGCCGAT GCGGTGTCAG AATTTGACGC CAACCCGACC
ATGCCTTTTT TTGAAATCCT CGATACCTCC CGATGGTCTG AAATCGCTCT GTTTATGAGG
GATAATGCAA GTCTTCGTTT TACCTATATG GCCTGTCTTT CGGGGATGGA TTATCCCGAA
GATGCGAAAC TGGGTATTGT CTGCAACCTC GAGTCGCTTG GAGAACATGG TCACAGAATT
GCGGTCAAGG TGAAATGCGA CAGAGATGGC GGGGCAATTC CTTCAGTTGC CAATGTCTGG
AAAACAGCTG ATTGGCATGA GCGCGAGGCA TTCGATATGT ATGGAATGCT GTTTACCGGT
CATCCGGATC TCAGGAGGAT TCTCTGCCCC GAAGACTGGG AGGGCTATCC GCTCCGCAAG
GACTATGAGG TTCAGGAGAA CTACCATGGC ATCAAGGTAC CGTATTAA
 
Protein sequence
MEESQGTIGQ SAVVEASRAA YAIIREKFAD AVSEFDANPT MPFFEILDTS RWSEIALFMR 
DNASLRFTYM ACLSGMDYPE DAKLGIVCNL ESLGEHGHRI AVKVKCDRDG GAIPSVANVW
KTADWHEREA FDMYGMLFTG HPDLRRILCP EDWEGYPLRK DYEVQENYHG IKVPY