| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0840 |
|---|
| Symbol | |
|---|
| ID | 6458531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 923335 |
|---|
| End bp | 923934 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724844 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002015533 |
|---|
| Protein GI | 194333673 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATG ATCTTGAGCA GCTTGAAGCT GCTGTTAACG TAAGTCATCC ATTATCGGAA
GATCGTTATG AGCTCGCGCT GGCCTATATC GATCGGGAGC GTTATAGCGA AGCTATAGCG
CAACTCGATG CTATTCTCGT TATGAGCCGC AATCATGTCA ACGCTCTCTA TTCACGTTCG
ATAGCGCATA TGTCTTCAGG TCATTATCGT CAGGCTGGCA ACGATCTTCT GAGGGTTGTG
ACCCTCGACA GGGCTTTTTT GCCCGCGTAT AAGAGCCTTG GCTATATTCA GTTGACGCTT
GGCAAGGAGG AGGCGGCAGT GAAAACCCTT CAGAAGGCTA TCGCTATCGA TCCCGATTAT
GTCGATGCCT ACTGTGTCCT GAGTGATGCC TTTATGGATC TTGGCCGCAA TGATGAGGCG
CTTGAGATGA TCAACAAGGC TCTTGAACTT GACCCTGAGG GCGAAGAGCC TCATTGCAAG
ATGGCGATGT ACTGTCTGGC GAGGGGAGAT TTCAAGCGTC TGCGCGCTGA GCAGGAAATT
CTGCAACGAC TCAATCCTGA TCTTGCCGGG CAGATAGGAA GCCTCTTTTT TGAACAATGA
|
|---|
| Protein sequence | MMNDLEQLEA AVNVSHPLSE DRYELALAYI DRERYSEAIA QLDAILVMSR NHVNALYSRS
IAHMSSGHYR QAGNDLLRVV TLDRAFLPAY KSLGYIQLTL GKEEAAVKTL QKAIAIDPDY
VDAYCVLSDA FMDLGRNDEA LEMINKALEL DPEGEEPHCK MAMYCLARGD FKRLRAEQEI
LQRLNPDLAG QIGSLFFEQ
|
|---|
| |