Gene Paes_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0835 
Symbol 
ID6459825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp918007 
End bp919692 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content51% 
IMG OID642724837 
Productsodium/hydrogen exchanger 
Protein accessionYP_002015528 
Protein GI194333668 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACC TTTCATTCAT CCATACCGTC CCGTTTTACG AGATCACGGC ACTCCTTGTG 
CTTGCCGCGA TAACAGGCAG TCTGAGCCTC CTGCTCCGCC AACCGTTGAT CGTCAGTCTC
ATCGCCGTCG GAGTCCTTGC CGGACCATCT GCACTCGATA TCGTTCAGTC GCATGAATAC
ATCGAGCTGA TGGCCGAACT CGGCATAGCC CTCCTGCTTT TTCTCGTCGG ATTGAAGCTC
GATATCTCTC TTGTCAGATC GCTCGGTCTT GTTGCACTGG CAACCGGTCT CGGACAGGTA
CTGTTTACAT CGGTCACTGG ATTTTTCATT GCGCAGGCTC TTGGTCTTGA TGTCCGGACC
TCAATCTATG TTGCCGTAGC ACTGACCTTC TCAAGTACCA TCATCATTGT AAAACTGCTT
TCAGATAAAA AGGAGGTTGA CTCACTCCAC GGTCGCGTCG CGCTGGGATT CCTTATCGTA
CAGGACCTCG TCGTGGTTAT CGCCATGATG ACCCTGTCAG CTTTCGCTGT CAGTAGCCAA
AGCACGGGAG AATACGACGG TCTGCTTCAA GTCGGATCGG TCATAGTCTA CGGCGGGCTC
ATGCTGCTGC TTGTCAGCAT CTTTGTCAGG TTTCTGGCAA ATCCGATTGT GAACCGTTTC
GCACGCTCAC CGGAACTACT GGTAACATTT GCGCTCGGAT GGGCGGCGCT TCTGGCCTCT
GCAGGTGATT TTTTCGGATT CAGCAAGGAA CTCGGAGGAC TGCTTGCCGG CGTCTCACTT
GCATCGACAC CATTCAGGGA ATCGATCGTC TCAAGAATGT CATCCCTGCG CGATTTCCTG
CTGCTGTTCT TTTTCATATC GCTCGGCATG AACCTTGATT TAAGCCTTCT TGGCTCCCAG
GTCGGCCCGG CCATTATCTT CTCACTGTTT GTTCTGATAG GCAACCCGCT GATCGTCATG
ATCATCATGG GAGTTCTGGG ATACCGCAAA CGAACCAGCT TTCTGGCCGG CCTGACCGTC
GCACAGATCA GCGAATTTTC TCTGATATTC ATGGCAATGG GCATGGATCT CGGGCATGTT
GACCCCGAGG CAATGGGACT CGTGACCCTT GTAGGGCTGC TCACCATAGC GATCTCTGTT
TACATGATCA CCTACTCCCA CACCCTCTAC CGCTTCCTTG AACCGCTGCT GGGCGTGTTT
GAAAAAAAGA TTCCGTCAAG AGAAATCGAG GCAAACAGTG AACAACTTGA AAACGCTCGC
TATGACATCA TTCTTTTCGG GATGGGCAGG TATGGCTCCG CAGTGGCCCA CTATCTCAAA
CAGGACGGAT ACAGAATTCT TGCAGTCGAT TTCAACCCCG ACGAAATCCG GCAATTAAAC
AAAAGAGGTT ATGACGCTAT TTACGGCGAC GCAAGCGATC AGGAATTTCT TGCCACCCTG
CCATTGCAGG GTGTGCAATG GGTTGTGTCA GCCGTGTCAC AGCACGAACT TGGACTTTCC
CGTGAAGACC CCCGAATGGT CCTGATTGAC GCTCTCAAAC ACACAGGTTT TACAGGCAGA
ATCGCTGTAT CGACCCAACG GATACAGGAA AAAGAAAGAC TGAAGGCAAA AGGAGCCGAT
ATTGTTTTCC TTCCGTTTTA CGATGCCGCC GAACTGGCTG CCAAACGCAT CAAAGAAATT
GGCTGA
 
Protein sequence
MFDLSFIHTV PFYEITALLV LAAITGSLSL LLRQPLIVSL IAVGVLAGPS ALDIVQSHEY 
IELMAELGIA LLLFLVGLKL DISLVRSLGL VALATGLGQV LFTSVTGFFI AQALGLDVRT
SIYVAVALTF SSTIIIVKLL SDKKEVDSLH GRVALGFLIV QDLVVVIAMM TLSAFAVSSQ
STGEYDGLLQ VGSVIVYGGL MLLLVSIFVR FLANPIVNRF ARSPELLVTF ALGWAALLAS
AGDFFGFSKE LGGLLAGVSL ASTPFRESIV SRMSSLRDFL LLFFFISLGM NLDLSLLGSQ
VGPAIIFSLF VLIGNPLIVM IIMGVLGYRK RTSFLAGLTV AQISEFSLIF MAMGMDLGHV
DPEAMGLVTL VGLLTIAISV YMITYSHTLY RFLEPLLGVF EKKIPSREIE ANSEQLENAR
YDIILFGMGR YGSAVAHYLK QDGYRILAVD FNPDEIRQLN KRGYDAIYGD ASDQEFLATL
PLQGVQWVVS AVSQHELGLS REDPRMVLID ALKHTGFTGR IAVSTQRIQE KERLKAKGAD
IVFLPFYDAA ELAAKRIKEI G