Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0832 |
Symbol | |
ID | 6459598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 914011 |
End bp | 915375 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642724834 |
Product | recombination factor protein RarA |
Protein accession | YP_002015525 |
Protein GI | 194333665 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAGG ATGTCGGGCA GACAACTCTT TTTGGTCTTC CTGAACCGCA AGGTTCAGCA ATGAAGGGCT CTTTCAGTCC TCTTGCAGAA CGCGTGAGGC CGCAAACACT TGACCAGATA GCCGGCCAGC GTCATCTTGT GGCCGAGGGA GCCCCTTTGC GCAGGTTCCT TGAAGAGGGG CGTTTGCCCT CACTTATTTT CTGGGGCCCT CCAGGTTCAG GGAAAACCAC TCTTGCTGAA ATTTGCGCTC ATTGGCTTGA TTTTCGTTTT GCAAAGCTTT CAGCTGTCGA TGCAGGGGTC AAAGATGTTC GTCAGGCTCT TGAACAGGCA GACAAGGCAA GACGGATTGA AGGACAGAGG AGCTTGCTGT TTATTGACGA GATTCATCGC TTCAACAAGG CGCAGCAGGA TTCCCTGCTG CATGCCATCG AGCAGGGGAT CGTGGTTTTG ATCGGGGCAA CGACTGAAAA CCCTTCTTTT GAAGTCAATG CAGCGCTTAT GAGCCGTATG CAGGTCTATC GGCTCAAACC GCTTGACAGG GATGAACTGA AGCAGGTTGT CATGAGGGCC TTGAAGACCG ATCAGCTTCT TTCAGACGCT GGTATTGTTA TCGATGACTG GGATGTTCTG CTTGAGTTTT CAGCAGGAGA TGCCCGTAAG GCGCTCAATG CTGTGGATGC GGCGGCTGCA ATGGCTCCGA ACGTCGGTTC GGTTCATATT AACCGCGAAC TTCTGATGCA GGTTCTGCAG CAGAAACTTC CATCTTACGA TAAAAAAGGG GCATATCATT ACGATATTAT TTCGGCATTC ATCAAGTCGC TGCGTGGCTC GGATCCCGAT GCTGCGCTTT TCTGGCTTGC AAAAATGCTG GAGGGAGGAG AAGATCCGAA ATTTATTGCC CGCAGAATGG TGATTTTCTC GAGTGAGGAT GTCGGAAACG CAGATCCTTA CGCATTGACG CTTGCTGTTT CGGTTTTTCA TGCTGTTGAG ATGATAGGGT TGCCGGAAGC AAGGATCAAT CTCGCCCAGG GAGTGACGTA TCTTGCATCC TGTTCGAAAT CGAATGCCAG CTATCGGGCA CTCAACGATG CCCAGCAGTT TGCAGCCCGT CATCAGGATG AACCTGTGCC GATGCATCTG TGTAACGCGC CGACAACGTT TATGAAGCAG GCAGGCTATG CTCAAGGCTA TCGCTATCCG CACGATCATC CGGGTCACTT CGTCGAAGAA CGCTATTTTC CTGAAGGGGT CGATGCGACG TTTTACCGGC CTACTCTTGA AGGTCGGGAG AAATTTATCA GTGAGCGTCT CAGCGCATTG TGGCGGGACC GATATACTGG GCCGTCTGAT GCTTCGGGTG GGTAA
|
Protein sequence | MAEDVGQTTL FGLPEPQGSA MKGSFSPLAE RVRPQTLDQI AGQRHLVAEG APLRRFLEEG RLPSLIFWGP PGSGKTTLAE ICAHWLDFRF AKLSAVDAGV KDVRQALEQA DKARRIEGQR SLLFIDEIHR FNKAQQDSLL HAIEQGIVVL IGATTENPSF EVNAALMSRM QVYRLKPLDR DELKQVVMRA LKTDQLLSDA GIVIDDWDVL LEFSAGDARK ALNAVDAAAA MAPNVGSVHI NRELLMQVLQ QKLPSYDKKG AYHYDIISAF IKSLRGSDPD AALFWLAKML EGGEDPKFIA RRMVIFSSED VGNADPYALT LAVSVFHAVE MIGLPEARIN LAQGVTYLAS CSKSNASYRA LNDAQQFAAR HQDEPVPMHL CNAPTTFMKQ AGYAQGYRYP HDHPGHFVEE RYFPEGVDAT FYRPTLEGRE KFISERLSAL WRDRYTGPSD ASGG
|
| |