| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0823 |
|---|
| Symbol | |
|---|
| ID | 6459251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 902718 |
|---|
| End bp | 906488 |
|---|
| Gene Length | 3771 bp |
|---|
| Protein Length | 1256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642724825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002015516 |
|---|
| Protein GI | 194333656 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATA CAGAACAAGA GCCTCGTATT TCAATTGAAA AAGCGATCCT TGCAGATGTC
TGTCTGGGCA TTCCGCTTGG GAAAATTGCA CTTGATATTC CAGAGCATCT GCAGGAATGT
GACATCTCTC TTGATGATCA GCCCGGGACC TATCTTTTCC GTGGTGAACA ACTGGCCGTG
ATGAAACGGC TCTATCAGAA GGGGCATGCA AGCGTTGTTG ACGCTGTATC CTCACTGGTT
GCTATGGCCG ATGACGCATG CAAAACTTCT CGGCTCAGCG TTACCGATAA ACCGAATTTT
CGTTTCAGTG ATAATCCGCA CGATTACCAG AGCCTGGCAA AGTATGCATG GCCGGCTGAC
GGTCAGTCTG AGAGTGAAAA GCCGTTTGTG CTTCGTGATG GGGAGGTTAA TCCCGATTGC
TATTCGGATG ATTTTGATTA TGTGCGGCTG GTTCGGTTTT CCGATACCGT AGTCCTGCTG
TCACTTGCAG CCTATCTGAC CGGGAGGCAT TTTTATGCAG ATAGGGCTTC CAGACTCTGC
AGCATCTGGT TCCTGAATGA CGATACCCTC CAAGCGCCTC ATTTCGCTAT GTCTCAGGTG
CTTCCTGGAA GTACTCGCCT TCGTTGGTCC GGTATTATTG AAGCTCGTTT TTTTGTTTAT
GTAACTGAGG CAATCCGGTT GCTTGATGCT TGTGAGGCTT TCGATGAGTC TGAACAGAAA
GGGCTCCGCA GCTGGTTTTC AGATTTCCTC GACTGGATGC AGCAGTCCGA ACAGGGGCAG
GCAGCTCGTA AAGCTAAAAA TAATATTGGT TTCTGGTACG ACCTGCAGTG TATGGTGTAT
GCCGATTTTT GTGGGCGTGA TGCCGAATGC GAAGCGATTA TCCATCAGGC TGTTTTGCCG
CGTCTCGAAA GGCAAATGGC TTGTGATGGC AGCCTTCCAG AAGAGCTGAC GCGGGCTTAT
CCTCACGATT ATGTTGTGTT CAGCCTTGCT GCTATGGCGC TGATCAGTCG CGGTGCTGAA
AAGGTCGGGA TTTCACTTTG GGATTCAAAG CAAAGCGACG GTCGCAATTT TCAGGCTGCT
CACGACTGGC TTCTCAAGGC AGCCAATTCG AGCAGTTTGC TTGCTCAAAT CCCCTTCAGC
GATAGTCGAT GCATTGAGTC GTTTCATGGC CTTGGGCCGA TTCTTGATAT GGGCATCGAA
CAGCGGGCAA TCCTTAGAAT TCTGGATGCA AGCACGACAA AACTTAATAA GCTCGAATCA
GAATACGCGC TGTTGCAGCA AGAACAGCTG CATCGTACGT CAGAGAACAC CAGGCTTCAA
CAGGAGATTG ACAATATCAA ATCGAGTACC AGTTGGCAGC TTACCCGTCC CTTGCGGTTT
CTCCGGCAGG TGGCGCGTCG TTCTGCAAAA AAGAATTGCT TCAAGACCGT TTTTTCTCAA
AGTGTCAAGC CTTCAGGAAA CGTTTCTCTG TCTTCAGATA TCAAGTCAGG GTTCAAGAGA
TACCGGAAAG CGTTATTCAC AAAAGCCGGA ATTTTCAGGC ATTTAAGGAC ATTTTTTCCT
GCTGCGTCTG TCAGAGACCC GCTCACCTTA TTGACATCTC ACCAACCGCC TCGCGAAAAA
CGGCTCATGC AGGAATATCG TCATAGTGAA CTTGCAAAGA TGCCGGACAC CTTTGTGCTC
TATCGCATCA TCGGTAATGA TCTTGTGCCG CGCCACAAGA AAGGACAGTC TCGGGAAAAC
CTGCGTTTTG TGCTTGAAAA TGAGCCCGCA CTGCCCAACT GTGATAAACG CTGGGTTGTT
AATCGCATTT TCGACCAGGA CGAGGAGCGG CGAGTCATCG CTATGCTGGA AGAGTACCGG
CAGCCCTACA TCCATATCCC CTTTGATGTT CTGGAGTATA GGCAGATCGG TTGGGATTTT
GACGCTTTGC CTGAGCCGGG GTATCTCAAC AGTAAAGCAT TCCTGAAACT GACAACGGAG
CAGCAGGGGC GCCTCCGCAC AGCGCTGTAT CGACTGAAAA ACAATTATGT AATGCATAAT
AACGGAGCTC GCAATACCGC ACTTCGTGAT GGCTTTGCAA GGGCTAAGTG GGTGTTGCCC
TGGGACGGTA ATTGCTTTCT TACCAGCGAA GCGTGGCGGG AGATCTCGCA TATGGTAACC
CAGCGAGCAC ATCTCAGCTA CTTTGCCGTT CCAATGGATC GCATTACCGA CAATGCTCTG
CTGTTACGGC CCGACTACAA GCCTAATCCG GTTGAGGAAC CTCAACTGCT TTTCCGCTGC
GATGCCGACG AGATGTTCAA TGAGGACTAT CCTTATGGTC GCAGACCAAA GGTTGAGCTG
TTCTGGCGAC TTGGCATTCC TGGGCCATGG GATCGCTGGA AAGACGATCT CTGGGATCAG
CCCCGCCGAG GTCTGTCTCC GGAGAAAGGC CGGTTTGGTG TTGCAGGCTG GGTTGCACGG
ATGTATTCCG GTGTCAAAAG CCTTGAAACG GAAGATAAGG CGGCATTTAA AAATCGCGGA
ATAAAGCGCC AGGAGGCAAT CATCGCTGCT ATCGGTCATA TTGACGCACA GGTGCATGCG
GACCATTCTA ACCCGCTTGG CTTGACCTTT TATAATGAAC AATGGTTGAC AAGAGCAAAG
CAGTCTCTGC TTGATTCCGA TGACAATGCC CTTCAAAAGT CGGCACAACA GCTTCTCGAA
AGAGCCGAAC AGATACTGTC TGAGGGATTA TACTCGGTTA CACAGAAGTC TAGCCTTCCT
CCCAGTGGAG ACCTGCACGA TTATTGGCAT CCGGCGCCTT ACTGGTGGCC AGATCCGGAT
TCCCCCGATG GTCTGCCATA CATTTGGAAG GATGGTCAAC GAGTGCCGGG TACGCGTATG
TATGAGCCGG AAAGTGCCAA GTATGATCGT ACCCGGCTCC AGCTGATGCT GGATGGAACG
ACGACAATGG CGCTTGCCTG GTATTTGACA GGACGGGAAG ACTTTGCACG CCATGGCGCC
AGTTTATTGC GCACCTGGTT CCTGAATCCC GAAACGCGGA TGAATCCCCA CCTGCGTTAT
GCCCAGGTGA GGATGGGGCA TAATAATAAC GAAGGATCAC CTGGTGGTAT CATTGAGTTC
AAAGACATGT ACTATTTTCT TGATGCTGTT CGTCTGCTTG AACGATCAGA AGCGTTAAGC
CTGTCTGAGA TCAAGACGTT TAAGATATGG TTGCATGAAT ATCTGAGCTG GCTGGAAACA
AGCCGGCAAG GTGAAAAAGA GAAGATCGCT TCGAACAATC ATGGTACGTA TTTTGACCTT
CAGGCAGGAG CAATGACGGT TTATCTCAAT GAACCTGAAA AGTATCGTGA TGTTATGTTT
CGTGCGCTCT CTCGCATTCC GCAACAGTTT AGCGAAGCTG GTGAACAACC CGAGGAAATG
AGACGCACCA TAACACAGCA CTATTGTTTC TTTAATCTGC AGGGCTGGCT CAATATCATC
AGATTAGCGC AAGCAAGTAG GTTTTTTTTG GGGCAATTCA GCAACGAGCC ATTGATACGA
ATTGCCCGAT CCTGTCAATG GGTTCTCCAG CATGACCAGA CCCGGTGGCC TTACAAGCAG
ATTGAGCCCT TCGATCCCGA TCGCCAATAT CCGCTATCGC TTATGGCACT TGTTTGCAGC
CTGAGTGCGG AAAGTGGTGT TAAGGCGAGT GACTATCTTG AGAAAAAAAC GGTTTTTAAT
CCTCATGATG CAGTGGCGCC GTACTGGAAT GTGGGCGTGG CTATAGAGTG A
|
|---|
| Protein sequence | MKHTEQEPRI SIEKAILADV CLGIPLGKIA LDIPEHLQEC DISLDDQPGT YLFRGEQLAV
MKRLYQKGHA SVVDAVSSLV AMADDACKTS RLSVTDKPNF RFSDNPHDYQ SLAKYAWPAD
GQSESEKPFV LRDGEVNPDC YSDDFDYVRL VRFSDTVVLL SLAAYLTGRH FYADRASRLC
SIWFLNDDTL QAPHFAMSQV LPGSTRLRWS GIIEARFFVY VTEAIRLLDA CEAFDESEQK
GLRSWFSDFL DWMQQSEQGQ AARKAKNNIG FWYDLQCMVY ADFCGRDAEC EAIIHQAVLP
RLERQMACDG SLPEELTRAY PHDYVVFSLA AMALISRGAE KVGISLWDSK QSDGRNFQAA
HDWLLKAANS SSLLAQIPFS DSRCIESFHG LGPILDMGIE QRAILRILDA STTKLNKLES
EYALLQQEQL HRTSENTRLQ QEIDNIKSST SWQLTRPLRF LRQVARRSAK KNCFKTVFSQ
SVKPSGNVSL SSDIKSGFKR YRKALFTKAG IFRHLRTFFP AASVRDPLTL LTSHQPPREK
RLMQEYRHSE LAKMPDTFVL YRIIGNDLVP RHKKGQSREN LRFVLENEPA LPNCDKRWVV
NRIFDQDEER RVIAMLEEYR QPYIHIPFDV LEYRQIGWDF DALPEPGYLN SKAFLKLTTE
QQGRLRTALY RLKNNYVMHN NGARNTALRD GFARAKWVLP WDGNCFLTSE AWREISHMVT
QRAHLSYFAV PMDRITDNAL LLRPDYKPNP VEEPQLLFRC DADEMFNEDY PYGRRPKVEL
FWRLGIPGPW DRWKDDLWDQ PRRGLSPEKG RFGVAGWVAR MYSGVKSLET EDKAAFKNRG
IKRQEAIIAA IGHIDAQVHA DHSNPLGLTF YNEQWLTRAK QSLLDSDDNA LQKSAQQLLE
RAEQILSEGL YSVTQKSSLP PSGDLHDYWH PAPYWWPDPD SPDGLPYIWK DGQRVPGTRM
YEPESAKYDR TRLQLMLDGT TTMALAWYLT GREDFARHGA SLLRTWFLNP ETRMNPHLRY
AQVRMGHNNN EGSPGGIIEF KDMYYFLDAV RLLERSEALS LSEIKTFKIW LHEYLSWLET
SRQGEKEKIA SNNHGTYFDL QAGAMTVYLN EPEKYRDVMF RALSRIPQQF SEAGEQPEEM
RRTITQHYCF FNLQGWLNII RLAQASRFFL GQFSNEPLIR IARSCQWVLQ HDQTRWPYKQ
IEPFDPDRQY PLSLMALVCS LSAESGVKAS DYLEKKTVFN PHDAVAPYWN VGVAIE
|
|---|
| |