Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0814 |
Symbol | |
ID | 6458876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 893221 |
End bp | 894588 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642724811 |
Product | outer membrane efflux protein |
Protein accession | YP_002015507 |
Protein GI | 194333647 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.881482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTCC CGTTTCTTTG CGATAATAAT TTGTTTGTCA TGATCATGAA TCACGCTATG CATTCCGGTT TTCAGCCGCA GAGAATACTC CTGCTTCTGC TCCTTATCAT GATGTGTTCA GTCCGGACAG CTTCTGCTTC AGAGCTTTTG AGCCTTGACG AGGCAATCAG CATCGCCATG GAGCATAACC CGGATATCAG AGTTGCAAGG GGAGAGGAGC GCATTGCCCG CAACAAGGTC AATATCGGCA ATGCGGGACT TCTTCCTTCC ATTGACCTTG TTGGCTCGGT TTCCTATCAG AATACAGAGG ACGCCCAGCT CTCCTCTATG GACGAATCAA CGACGACAAG CGCAAAACTG CAGGCTTCCT ATACGTTGTT CGATGGATTT GGTAATATCT ACACCTTCAG AAAGCTGAAA ACAGCCGGTC GTCTTGGTTC ATTGCAGGCA AAAAACCGTA TCGAGCAGAT CATTCTGGAT GTCAGCGAGG CTTATTACCG TTTTGCCGAT GCTACGGCAC AGCTTGACGT GGCACGCAAG GCTCTTTCGA TCTCTGATGA ACGGCTCAGG CGTGCGCGCC TGCGCTCGGA ATATGGTCAG GCAAATTCTC TTGAGGTTCT TTCGGCTACT GTCGATGCCA ATGCGGACAG TGTCGCTTCC ATGCAGGCTG GCCTGGAATA CAATGCTGCC CGACGCTCGC TGAATCTTCT GCTTCATCGT CCGGTTTCAA CCCTTTGTTC GGTTGAAACC GATGTTCAAT TTGTCCCTGA TATGACCAGG GAAAGGGTTC TCGAAGGGGC GCGTCAATCC TTTGCAGAAT ATCGTATCGC CGAGGAGAGT GTTCGTCAGG CACAGCATGA ACTTGGTATT GCCAGATCGG ATTTTTTTCC CGAGATCAGC ATGCAGGCAA ACTATGGATA CAGCCAGACC GACCCTGGGC TCATGGTCGA TATGGATGAT CCTTCTGAGG GTTTTTCGGC CTCACTTACC ATGACGCTGC CCTTGTTTAA CGGTTTTCGT TCCTCGATAG CTCATCAGAA TGCCAGGATT GCCTTGCAGA ACAGTCAAGT TCGGCTTGAA CAGGCTGCCA TAGAGCTCGA GGGGCTGGTT GGCGATACGT GGGACGCCTA TCGCAACAGC CTCGATATTC TTGATTTTCA GCAGAAAAAT CTTGAAACAG CCGAGTTGAA CTTCAGACGT ACAAATGAGC TGTATGTACT TGGCCAGGCA ACAAATACAA CGTTTCGCGA GGCACAGCTC AACCTGATCA GTGCCCGCCA GGCTATTGCA AGCGCACGCT ATGAAGCAAA GCTTTTTGAA ATCCGGTTGA TGCGAATCGG AGGCTTTCTT GTTATTTCTG AAAAATAG
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Protein sequence | MSLPFLCDNN LFVMIMNHAM HSGFQPQRIL LLLLLIMMCS VRTASASELL SLDEAISIAM EHNPDIRVAR GEERIARNKV NIGNAGLLPS IDLVGSVSYQ NTEDAQLSSM DESTTTSAKL QASYTLFDGF GNIYTFRKLK TAGRLGSLQA KNRIEQIILD VSEAYYRFAD ATAQLDVARK ALSISDERLR RARLRSEYGQ ANSLEVLSAT VDANADSVAS MQAGLEYNAA RRSLNLLLHR PVSTLCSVET DVQFVPDMTR ERVLEGARQS FAEYRIAEES VRQAQHELGI ARSDFFPEIS MQANYGYSQT DPGLMVDMDD PSEGFSASLT MTLPLFNGFR SSIAHQNARI ALQNSQVRLE QAAIELEGLV GDTWDAYRNS LDILDFQQKN LETAELNFRR TNELYVLGQA TNTTFREAQL NLISARQAIA SARYEAKLFE IRLMRIGGFL VISEK
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