Gene Paes_0814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0814 
Symbol 
ID6458876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp893221 
End bp894588 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content50% 
IMG OID642724811 
Productouter membrane efflux protein 
Protein accessionYP_002015507 
Protein GI194333647 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.881482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCC CGTTTCTTTG CGATAATAAT TTGTTTGTCA TGATCATGAA TCACGCTATG 
CATTCCGGTT TTCAGCCGCA GAGAATACTC CTGCTTCTGC TCCTTATCAT GATGTGTTCA
GTCCGGACAG CTTCTGCTTC AGAGCTTTTG AGCCTTGACG AGGCAATCAG CATCGCCATG
GAGCATAACC CGGATATCAG AGTTGCAAGG GGAGAGGAGC GCATTGCCCG CAACAAGGTC
AATATCGGCA ATGCGGGACT TCTTCCTTCC ATTGACCTTG TTGGCTCGGT TTCCTATCAG
AATACAGAGG ACGCCCAGCT CTCCTCTATG GACGAATCAA CGACGACAAG CGCAAAACTG
CAGGCTTCCT ATACGTTGTT CGATGGATTT GGTAATATCT ACACCTTCAG AAAGCTGAAA
ACAGCCGGTC GTCTTGGTTC ATTGCAGGCA AAAAACCGTA TCGAGCAGAT CATTCTGGAT
GTCAGCGAGG CTTATTACCG TTTTGCCGAT GCTACGGCAC AGCTTGACGT GGCACGCAAG
GCTCTTTCGA TCTCTGATGA ACGGCTCAGG CGTGCGCGCC TGCGCTCGGA ATATGGTCAG
GCAAATTCTC TTGAGGTTCT TTCGGCTACT GTCGATGCCA ATGCGGACAG TGTCGCTTCC
ATGCAGGCTG GCCTGGAATA CAATGCTGCC CGACGCTCGC TGAATCTTCT GCTTCATCGT
CCGGTTTCAA CCCTTTGTTC GGTTGAAACC GATGTTCAAT TTGTCCCTGA TATGACCAGG
GAAAGGGTTC TCGAAGGGGC GCGTCAATCC TTTGCAGAAT ATCGTATCGC CGAGGAGAGT
GTTCGTCAGG CACAGCATGA ACTTGGTATT GCCAGATCGG ATTTTTTTCC CGAGATCAGC
ATGCAGGCAA ACTATGGATA CAGCCAGACC GACCCTGGGC TCATGGTCGA TATGGATGAT
CCTTCTGAGG GTTTTTCGGC CTCACTTACC ATGACGCTGC CCTTGTTTAA CGGTTTTCGT
TCCTCGATAG CTCATCAGAA TGCCAGGATT GCCTTGCAGA ACAGTCAAGT TCGGCTTGAA
CAGGCTGCCA TAGAGCTCGA GGGGCTGGTT GGCGATACGT GGGACGCCTA TCGCAACAGC
CTCGATATTC TTGATTTTCA GCAGAAAAAT CTTGAAACAG CCGAGTTGAA CTTCAGACGT
ACAAATGAGC TGTATGTACT TGGCCAGGCA ACAAATACAA CGTTTCGCGA GGCACAGCTC
AACCTGATCA GTGCCCGCCA GGCTATTGCA AGCGCACGCT ATGAAGCAAA GCTTTTTGAA
ATCCGGTTGA TGCGAATCGG AGGCTTTCTT GTTATTTCTG AAAAATAG
 
Protein sequence
MSLPFLCDNN LFVMIMNHAM HSGFQPQRIL LLLLLIMMCS VRTASASELL SLDEAISIAM 
EHNPDIRVAR GEERIARNKV NIGNAGLLPS IDLVGSVSYQ NTEDAQLSSM DESTTTSAKL
QASYTLFDGF GNIYTFRKLK TAGRLGSLQA KNRIEQIILD VSEAYYRFAD ATAQLDVARK
ALSISDERLR RARLRSEYGQ ANSLEVLSAT VDANADSVAS MQAGLEYNAA RRSLNLLLHR
PVSTLCSVET DVQFVPDMTR ERVLEGARQS FAEYRIAEES VRQAQHELGI ARSDFFPEIS
MQANYGYSQT DPGLMVDMDD PSEGFSASLT MTLPLFNGFR SSIAHQNARI ALQNSQVRLE
QAAIELEGLV GDTWDAYRNS LDILDFQQKN LETAELNFRR TNELYVLGQA TNTTFREAQL
NLISARQAIA SARYEAKLFE IRLMRIGGFL VISEK