Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0796 |
Symbol | |
ID | 6460175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 873849 |
End bp | 875276 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724792 |
Product | phytoene desaturase |
Protein accession | YP_002015489 |
Protein GI | 194333629 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGTA TTGCTATCGT CGGAGCTGGA ATAGGAGGGC TCAGCGCTGC CGCAAGGCTT GGAAAAATGG GGTATGCTGT CGACCTGTAT GAAAAAAACC CTGTTCCCGG AGGAAAGGCT GTCGAACATC GCCAATCAAC CTCTTCAGGG TCATTCCGGT GGGATTGCGG ACCCTCACTC ATGACCATGC CCCATATTCT GCAGGACCTG TTTGCGTTCT GCGAAGAACG AATGGAGGAT CATATACCGC TGACACCGGT CGATCCCGCC TGTCGTTACC ACTGGACAGA CGGGACGGTC ATTGATGAAG ACAGAAGCTT CTGGAACCAG CCGGCTGTCC GGAAATATCT CGACTATGCT GAAGGTCTTT ATGCGCTTTC CGCTCCAGCC TTTCTTCAGC GCCCCCCCAG AGATTGGTGG AAAGCTCTCG GCGCAGAGAT GATCGAACAC ATAAAGCATC TGCCGAAATT CATGAACATG CAGAGCATGG CGACCTTTAA TCAGAAATTT TTTAACGACA AACACCTGCT GCAGATATTT GATCGATTCG CGACCTATAA CGGCTCATCA CCATTCAAGA CACTCTCGAC ATTTGCCATC ATCCCCTACG TCGAAGCCTC TTTCGGGGCA TGGTACCCGG AGGGCGGCAT CGCAAGAATC CCCGAGCAAC TTGCCCTGCT TGCCGAACGC CAGGGCGTCA GGCTCCATTA TAATCATGAA ATTCATGACC TTAACGCTCT GGATGCCAGC ATCAGAATCT GTAACGGAGA CAGCATAACA GCCCATCAGC GATGGCTGCC GCAAAGTCAT GAAGGGCGCA ATATGCTCCG TCACGACCTT GCCTGCTCCG GCTATATCAT GCAGCTTGGC GTCAGGAAGC AATTTCGCGA GCTTGAACAT CACAATATCC TCTTCAGTGA TCATTACAGG GAAGAGTTCG ATGATATCTT TGTCAAAAAA AAACTCCCCC GAGAACCAAC CATCTACATT GCCATTTCCA GTAAACGCCC CGGAAGCACC GATGCCCCCG ACGGATGCGA AAACTGGTTC GTGATGGTCA ACGCTCCAGC CACAACACCT CTTGACTGCA AAGGGTATGA AAAGGTTGTC TTCGACAGGC TGTCAAAGTT CGGGATCAAG CTGGAAGCAA AAGATATCGC CTGCTGCAAC AGCTTCAGTG CCGATGACTT CGAACGACAG CACAATGCAT GGAAGGGATC ACTCTACGGC TGGGCAAGTC ATACCATGCA GACAGCTCTT TTCAGGCCTC CGCTTCAGCA TCGCCAGCAC CCCGGCCTCT ATTTTACCGG CGGTACGACC CATCCCGGCG GTGGCATCCC GCTGGTGCTT CTGAGCGGAA AAATCGTATC TGAAATGGTT CTGCAGGATT TCCCGCACAC CAGATTCACG CCGATGCCGG CTGTATGA
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Protein sequence | MQRIAIVGAG IGGLSAAARL GKMGYAVDLY EKNPVPGGKA VEHRQSTSSG SFRWDCGPSL MTMPHILQDL FAFCEERMED HIPLTPVDPA CRYHWTDGTV IDEDRSFWNQ PAVRKYLDYA EGLYALSAPA FLQRPPRDWW KALGAEMIEH IKHLPKFMNM QSMATFNQKF FNDKHLLQIF DRFATYNGSS PFKTLSTFAI IPYVEASFGA WYPEGGIARI PEQLALLAER QGVRLHYNHE IHDLNALDAS IRICNGDSIT AHQRWLPQSH EGRNMLRHDL ACSGYIMQLG VRKQFRELEH HNILFSDHYR EEFDDIFVKK KLPREPTIYI AISSKRPGST DAPDGCENWF VMVNAPATTP LDCKGYEKVV FDRLSKFGIK LEAKDIACCN SFSADDFERQ HNAWKGSLYG WASHTMQTAL FRPPLQHRQH PGLYFTGGTT HPGGGIPLVL LSGKIVSEMV LQDFPHTRFT PMPAV
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