| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0784 |
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| Symbol | |
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| ID | 6459253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 858397 |
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| End bp | 859872 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642724780 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002015477 |
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| Protein GI | 194333617 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.649029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA GTAACTACCG GAAAATGGCT GTAGGCCTGC TTGCAGTCGG TCTTCTGTGG
ATGGGAGGGC CTGATTCTGT GCAGGCTCAG GCGCCTTCAG ATGATGCTCT TGTCTCTGCT
ACGGCAGATA AGGCGGGGGC AGTTCTTACT GTCAATCAGG TTGTTGAGAA GGTGATCAAC
AGCAATCCTG AGGTGCAGGC CAAGTGGCAT GAGTTCATGG CTGCCTATCA TGAAGAGGCG
ATTCCTTACG GCGGATATTT TCCGAAACTG GATGTTTCGG CCGGTATTGG CAGGGAATGG
GTCGGCGGTG ATGACATTGA CGACGATGTC TATACGCGCA GGGGGACTCG CGTGCAGTTG
ACTCAGATGC TGTTTGACGG GTTTTATACC TGTAATCAGG TCTGTCGTCT GAAATACGCC
GGCAAAGCAA GATATTTCGA GTTTCTTGAC GCTATGGAGC GTGTCGGTCT TGAGGGCTTG
CGGGCATATG CTGATGTGCA GCGTTATCAG TATCTTGTGC TGCTTGCCGA GCAGAACTAC
GCGTATCATA CAGAGATCTA CGATCAGATT CGCAACCGTG TCACGGGAGG TGTCAGTACC
GGTGTCGATA TGGAACAGAT CGAGGGTCGT ATCGCTCTGG CACAGTCGAA CCTGATTACC
GAGCGGGCAA ACCTGCACGA TGTGACGGCC CGGTACCAGC GTATCGTTGG GGAACTGCCT
CCAGACAAGC TTGAAGAGTT CGAGGTTCCT GATGCAGCTG TTCCTGCTAC GGTCGATGCG
ACTTTGGATG ATGCGTTCAG AAAAAACCCG GGTTTTATCG CATCGTTGAT GGATATCAAG
TCGGCTGAAC ATGCCGTGAA GGTTCAAAAA TCAAAATTTT ATCCCCGGTT TGACCTGAGA
GCATATCACG ACTGGAGCTG GGATAAAGAC GGAATTGACG GCTATCAGCG AGAAGGCGTG
GTCGAAGTGG TCATGAATTA CAATATCTTT AACGGCGGAT CTGATGCTGC CGCTGTCCGT
CAGTACAAGC AGAAGCTTTA CCGTACGATG GATTTGAAGG AGAAGGCCTG TCACGATCTT
CGTCAGACGG TGGAAATCGC GTTTAACGAT CGCCTGACGC TCAAGGATCA GCTTGAGTAT
CTTGATCAGC ATCGTAAACG TCTCGATCTT GTGCGTGTGG CCTATCTTGA CCAGTTTACC
ATAGGACGAC GAACCCTGCT GGATCTTCTT GATACGGAGA ACGAATATTT TCAGGCTCAA
CGAGCCTATA TGAACGGGTT GTTTGATAAG AAGATCGCTG ACGCGCGGAC CCTTTCGGGG
ATGGGACGGT TGTTGAACGA TATGGAAGTT GTCCGCTACG ATCTGCCGAC AATGGAAGAT
CTTGATTACA AACAACCATA TGTGAAACGT GCTGATTTCT GTGAGGTTGA GGCCCCTAAG
GGCACTACTG CTGGCATTGA CGATGTTGTT CAATAA
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| Protein sequence | MKHSNYRKMA VGLLAVGLLW MGGPDSVQAQ APSDDALVSA TADKAGAVLT VNQVVEKVIN
SNPEVQAKWH EFMAAYHEEA IPYGGYFPKL DVSAGIGREW VGGDDIDDDV YTRRGTRVQL
TQMLFDGFYT CNQVCRLKYA GKARYFEFLD AMERVGLEGL RAYADVQRYQ YLVLLAEQNY
AYHTEIYDQI RNRVTGGVST GVDMEQIEGR IALAQSNLIT ERANLHDVTA RYQRIVGELP
PDKLEEFEVP DAAVPATVDA TLDDAFRKNP GFIASLMDIK SAEHAVKVQK SKFYPRFDLR
AYHDWSWDKD GIDGYQREGV VEVVMNYNIF NGGSDAAAVR QYKQKLYRTM DLKEKACHDL
RQTVEIAFND RLTLKDQLEY LDQHRKRLDL VRVAYLDQFT IGRRTLLDLL DTENEYFQAQ
RAYMNGLFDK KIADARTLSG MGRLLNDMEV VRYDLPTMED LDYKQPYVKR ADFCEVEAPK
GTTAGIDDVV Q
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