Gene Paes_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0759 
Symbol 
ID6459425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp808479 
End bp809108 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content41% 
IMG OID642724756 
ProductRNA polymerase sigma factor RpoE 
Protein accessionYP_002015453 
Protein GI194333593 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.172693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACT CTTCCTCCTC ACATAAACCT CCCGCTCTGC TAAAAAAAGA GCACGTGTCG 
GCTCAGGAAC AGCAGAAACA AATCGAGTTT CAGCAGGAAG CCATACAGCA CATTAATGCA
TTATATAATT ATGCATTACA CCTGACAATG AATCCTGATG ATGCCAAGGA TCTCGTTCAG
GAAACCTATC TCAAAGCATA TAAATTCTTT GGCTCGTTTG AAAAGGGAAC CAACTGCAAG
GCGTGGCTGT TTAAAATCCT TAAAAACAAT TACATCAACA AATTCAGGAA AAACTCAAGA
GAACCCGGAA AGGTAGACTA TGACCTGATC AAGGATTTTT ATCATTCAAT CAAAGCAGCG
CAAAGCGATA ACGAAGATCT CAATGCGGGA TATTTTAAAT CGCTCATGCA TGATGAAGTC
TACCAGGCTC TGCAATCTCT CCCTGACGAG TTCAAAGAGG TGATACAATT ATGCGATATC
GAAGGGTTCA CCTATGAAGA GATTGCCAAC ATGGTGGAAA GCCCCATCGG TACAGTTCGT
TCACGCCTTT ACAGAGGCAG AAAGCTTTTA CGTTCCAAAC TGAATGATTT TGCCAAAAAA
TACGGTTACC ACACCGAAGA CAACGAATAA
 
Protein sequence
MINSSSSHKP PALLKKEHVS AQEQQKQIEF QQEAIQHINA LYNYALHLTM NPDDAKDLVQ 
ETYLKAYKFF GSFEKGTNCK AWLFKILKNN YINKFRKNSR EPGKVDYDLI KDFYHSIKAA
QSDNEDLNAG YFKSLMHDEV YQALQSLPDE FKEVIQLCDI EGFTYEEIAN MVESPIGTVR
SRLYRGRKLL RSKLNDFAKK YGYHTEDNE