Gene Paes_0739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0739 
Symbol 
ID6460401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp788975 
End bp790549 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content50% 
IMG OID642724736 
Product2-isopropylmalate synthase 
Protein accessionYP_002015433 
Protein GI194333573 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA AAGAAAAGGT TCTTATATTC GATACGACAT TACGCGACGG CGAGCAGTCT 
CCTGGGGCAT CGCTCAACGT TCAGGAAAAA ATTGAGATTG CCAGGCAACT CGAAAAACTC
AATGTTGATG TGATTGAGGC CGGATTTCCG GCCTCCTCGC CGCTTCAGTT AGAGGCAGTC
CGACGAGTAG GCGAAGAGTC CTCCAGAATT GTAGCGGCTC TTGCCAGAGC GGTTGAACAC
GATATCAGCA CAGCGTGGAA AGCGCTTCAA AGCGCTCGAC ATCCTCGTAT CCATACGTTT
ATCAGTACAT CGGATATCCA TATCATGGGC AAGTTTGGCC ATGAGCGCTA TGGAAAAACA
CTGGCTGAAA AACAAAAGAC CATACTCCGG ATGGCAGTCG ATGCTGTCCT CTACGCAAAA
ACCTTCTGTC ATGATATCGA GTTTTCGGCA GAAGATGCTG GACGCACCGA TCCCGGATAT
CTTGCAGAAG TCATTGAAGC CGTTATCGAT GCCGGAGCAA CAACCGTCAA TATTCCCGAT
ACAACCGGCT ACACGTGGCC ATCGGAATTC GGAAAAAAAA TAGCGGATCT GAAAGAAAGG
GTCACCAATA TTGACCAGGC GGTCATAAGC GTTCACTGCC ACAACGATCT CGGCCTCGCC
GTAGCAAATA CTCTCAGCGC CATAGAAAAC GGGGCACGTC AGGCAGAATG TTCTATCAAC
GGCATAGGAG AAAGAGCGGG AAACGCATCG CTTGAGGAGA TCGTTATGGC CCTCAAAGTA
CGCAGTGACC TGCACGACTA CTCCACCGGC ATTACAACAC GTGAAATATA CAACACCAGC
CGGATGGTAT CGTCGTTCAC CGGACTTATT GTACAGCCAA ATAAAGCTAT TGTAGGCGAC
AATGCATTTT CCCATGAGTC GGGTATCCAT CAGGACGGCA TGCTGAAAAA CCGTCAGACC
TATGAGGTCA TGACGCCTCA GTCGGTAGGA GTTCCCGAAA CCCATATCGT TTTAGGGCGT
CATTCCGGCA AACACGGCCT TCAGTCAAGG CTGCTTGTGC TCGGCTACAA GGTTGAGGGC
GAAGAGCTTG ACAAGGTCTA TCAAAGATTC CTCAGCGTTG CCGACAAGAA AAAAGAGATT
TATGACGATG ATCTGAGAGT GCTCATGGGT GACGAATTCA ACCGCCCTGC TGAGCCTATT
GAACTCGATT ATCTGCACAT CAACAGCGGG ACCGCATCCA TACCGACGGC AACAGTACGG
ATTAAAACCC GTGGCAGAAC ATTTGAAGAA TCGTCCACGG GAGACGGACC GGTTGACGCC
TGCTTCAGAG CGATCGAAAG GGCTCTGAAA CTCGATTCAC TTCTCAATTC CTACTCGGTA
CGTTCAACCT CCGCCGGCAG GCAGGCTCTT GGAGAAGCAA CGGTGCGGCT CAGGGACGGA
GATAATTTTT ATACAGGGCG AGGCGTTTCC ACCGATATTA TTGAAGCAAG TGCAAAAGCA
TATCTGCAGG CACTGAGCTT TCATGAGGAT GCCTTGCAAA ACGACAACAA CAATTCAATC
GATAACGGGA TATAA
 
Protein sequence
MSQKEKVLIF DTTLRDGEQS PGASLNVQEK IEIARQLEKL NVDVIEAGFP ASSPLQLEAV 
RRVGEESSRI VAALARAVEH DISTAWKALQ SARHPRIHTF ISTSDIHIMG KFGHERYGKT
LAEKQKTILR MAVDAVLYAK TFCHDIEFSA EDAGRTDPGY LAEVIEAVID AGATTVNIPD
TTGYTWPSEF GKKIADLKER VTNIDQAVIS VHCHNDLGLA VANTLSAIEN GARQAECSIN
GIGERAGNAS LEEIVMALKV RSDLHDYSTG ITTREIYNTS RMVSSFTGLI VQPNKAIVGD
NAFSHESGIH QDGMLKNRQT YEVMTPQSVG VPETHIVLGR HSGKHGLQSR LLVLGYKVEG
EELDKVYQRF LSVADKKKEI YDDDLRVLMG DEFNRPAEPI ELDYLHINSG TASIPTATVR
IKTRGRTFEE SSTGDGPVDA CFRAIERALK LDSLLNSYSV RSTSAGRQAL GEATVRLRDG
DNFYTGRGVS TDIIEASAKA YLQALSFHED ALQNDNNNSI DNGI