Gene Paes_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0737 
Symbol 
ID6460011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp787066 
End bp787626 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content50% 
IMG OID642724734 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002015431 
Protein GI194333571 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit
[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.988223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCA TCATACAAGG AAAAGCCTAT GTGCTGGGCA AAAACATCGA TACAGACCAG 
ATCATTCCTG CCGAACACCT CGTCTACAGT CTCTCAGACC CTGAAGAGGT CAAGCTCTAT
GGCAAATACG CCCTTTCCGG CGTACCGGTT GCCGAAGCAG GTCTTCCGGA AGGAAACACT
CCCTTTGTCG CAGACAGCAG TTTCGAGTCT GAATACGTGA TCATCATCGC GGGTCCGAAT
TTCGGTTGTG GCTCATCTCG TGAACATGCG CCCTTTGCAC TCCAGGTTGC CGGCGTCAAG
GCAATTGTCG CAGAATCCTA TGCCCGAATT TTTTACCGCA ACTGCGTCGA TGGCGGATTT
GTGATCCCTT ATGAGACTTC AGAACAGCTC AATAAATCCG TTCTGACAGG TGACGAACTG
AAAATCGACG TCCAGAACAA TACGATTACC AACCTGACCC AGAATATCAC CTATACCCTG
TCGCCGCTCG GTGATGTTCT TGAAATCGTC AAGGCAGGCG GCATTTTTGC CTATGCCAGG
CAGGAAAACC TTATGGCTTG A
 
Protein sequence
MDSIIQGKAY VLGKNIDTDQ IIPAEHLVYS LSDPEEVKLY GKYALSGVPV AEAGLPEGNT 
PFVADSSFES EYVIIIAGPN FGCGSSREHA PFALQVAGVK AIVAESYARI FYRNCVDGGF
VIPYETSEQL NKSVLTGDEL KIDVQNNTIT NLTQNITYTL SPLGDVLEIV KAGGIFAYAR
QENLMA