Gene Paes_0735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0735 
SymbolradC 
ID6460195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp784468 
End bp785139 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID642724732 
ProductDNA repair protein RadC 
Protein accessionYP_002015429 
Protein GI194333569 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC ATGACCTTGA CCCCGAAAAC CGGCCGAGGG AACGCTTTCT CCGCTCCGGA 
GTTTCGGCGC TCAGTTCGGC AGAACTGATG GCACTTATCC TCAAAACGGG AACAAAAAAG
CATAACATTA TCGAGACCTG CCAGGAAATG CTCTCCATCT ACGGCCTGGA AAAGCTGGCA
GATCTGTCAC TCGCGGAACT ACAGAAAATA AATGGGATAG GTCCGGCCAA AGCCATGCAG
ATCAAAGCGG TATTCGAACT CCATCGGCGA ATGCATTTCA GACGCAACAC AAACAAAAAA
ATCCGCTCAG CCAGAGATGT GTTTGATTAC ATGCAGGGCA GGCTACCCGA TGAGATGCGG
GAACACCTTT TTCTGCTCAA CCTGAACACA AAAAACCAGA TTATCCGGCA TGAAATCATA
TCAGTCGGAA CGCTGAACGC GTCACTCATT CACCCAAGGG AAATCTTCAA AGAGGCTATC
AGAGAGAGCG CCCACGCAAT CATCGTTGTG CACAATCATC CATCAGGCGA CGTTGAGGCA
AGCAATGCCG ACAAGCAGGT TACTGCCGTT TTGAAAAAAG CGGGCTCACT CCTGCAGATT
GAGCTGCTGG ATCATGTCAT TATCGGAAGA GAGACCTATT TCAGTTTCAG AGAGCACTCT
CTTCTTGGAT AA
 
Protein sequence
MRIHDLDPEN RPRERFLRSG VSALSSAELM ALILKTGTKK HNIIETCQEM LSIYGLEKLA 
DLSLAELQKI NGIGPAKAMQ IKAVFELHRR MHFRRNTNKK IRSARDVFDY MQGRLPDEMR
EHLFLLNLNT KNQIIRHEII SVGTLNASLI HPREIFKEAI RESAHAIIVV HNHPSGDVEA
SNADKQVTAV LKKAGSLLQI ELLDHVIIGR ETYFSFREHS LLG