Gene Paes_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0726 
Symbol 
ID6459712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp774671 
End bp776068 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content52% 
IMG OID642724723 
Productbeta-lactamase domain protein 
Protein accessionYP_002015420 
Protein GI194333560 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.723322 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCG AGTTTTACGG GGCGACAGGA AGAATCACCG GTTCATGCCA TATTCTGCGA 
TCGTCCGGGT ATACGATTCT GGTTGATTGC GGCCTGATAC AGGGGTCTGC AGAGGAGGAG
GCCCTGAACA GAGAGCCTTT TCCTTTTGAC CCTCGCGCTA TCGATGCTGT GGTGCTGACC
CATGGCCATA TCGATCACTC AGGCCGTCTT CCGCTTCTTG TCAAAGAGGG GTTTCGGGGC
CCTGTTTTTA CGCAGCAAGC TACCAGAGAC CTCTCTCTTG TGCTGCTGCA GGATTCGGCC
CGTCTGGGTG AGCAGGATGC TCGATACAAA AACCGGCAAC GCGCTAAAAA AAAACTTGAC
CCCATAGAGC CGCTCTATCG CGTTGAGGAT GCTATCGAGG CGGTCAACAG CATGGTGCCT
CTGCCATATG AAGCTGAAAA GGAGATTCTG CCGGGCATTA CCATCACGTT TCACGATGCC
GGTCATATTC TCGGTTCGGC GATTGTTGCC TTTATGCTGA ACGAAAACGG TGTTCGACGT
AGACTTGTTT TCAGCGGAGA TCTCGGCCAG TATGATACCC CTATTCTGAA TGATCCCGCG
CTGATAGAAC ACGCTGACGC CGTGGTCATC GAGAGTACGT ATGGAGACCG CCTTCACAGG
GAACGGGACG AAACGCTTCA GGAGATCGGA CGCATTCTGC AGGATGCCTG GGATGAAGGG
GGCAACATTC TTATTCCTGC TTTTGCTATC GGTCGAAGCC AGGAACTGCT GTATCTTTTT
GCTAAATATG CTCGAGAATG GGAGCTGGAT CGGTGGCAGA TCTTTCTTGA CAGTCCGATG
GCCATAGAAG CGAGCGCTAT TTACTGGGAT CATCCGGAAT TATATGATGA AGAAGCACGA
CTTTTCCGTA GCAATATCGG ATCTATGGCC AGACCGCAGA ATCTTCATTT TACGAGGAGT
GCCGAAGAGT CCCGTACAAT AAACGATATT GGCAAAGGTG CGATTATTAT CGCCGGAAGC
GGGATGTGTA ATGGGGGAAG GATTCTCTAT CATTTGAAAC ACAATCTTGG TTGCAGTGCA
TGCCATATTA TGATTACCGG CTATCAGGCC GAAGGGACTC CCGGCAGGAG GCTTGTCAAC
GGAGAGGAGA CGATGCGTAT TCATGGCAGT GAGTATCGGG TCGCCGCCAG AGTGCATACT
CTTGGAGGGC TTTCAGCGCA TGGCGATCAG CGCGATCTTC TTCGATGGGC GGGCGGTTTT
AAAAGCCGTC CCCGTTTTTT TGTGGTTCAC GGAGAGGATG AGCCGAAAGT GGTATTGGCA
GAAAAACTTC GCGAGTTGAA GGGATCTGAT GTGATCATTC CCGGACCGGG GGAGATTTTC
GATCTGGCTC CTGCCTGA
 
Protein sequence
MELEFYGATG RITGSCHILR SSGYTILVDC GLIQGSAEEE ALNREPFPFD PRAIDAVVLT 
HGHIDHSGRL PLLVKEGFRG PVFTQQATRD LSLVLLQDSA RLGEQDARYK NRQRAKKKLD
PIEPLYRVED AIEAVNSMVP LPYEAEKEIL PGITITFHDA GHILGSAIVA FMLNENGVRR
RLVFSGDLGQ YDTPILNDPA LIEHADAVVI ESTYGDRLHR ERDETLQEIG RILQDAWDEG
GNILIPAFAI GRSQELLYLF AKYAREWELD RWQIFLDSPM AIEASAIYWD HPELYDEEAR
LFRSNIGSMA RPQNLHFTRS AEESRTINDI GKGAIIIAGS GMCNGGRILY HLKHNLGCSA
CHIMITGYQA EGTPGRRLVN GEETMRIHGS EYRVAARVHT LGGLSAHGDQ RDLLRWAGGF
KSRPRFFVVH GEDEPKVVLA EKLRELKGSD VIIPGPGEIF DLAPA