Gene Paes_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0718 
Symbol 
ID6459914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp765961 
End bp766977 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content54% 
IMG OID642724715 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_002015412 
Protein GI194333552 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.496144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA CAGCATGGAC AATTGGCGAC ATCCACGGTA TCGGACCGGA AATCATTCTG 
AAAACGTTTG ATGAATCGCT GCGCTCAACC GGTCAGCCAG AAGAAAAACC AATCGTTATC
GGCTCGGCTG AAGCGCTTCT TTACTACAGC AAACGCCTCG GTCTGTCTAT CGATATCCGT
ACCATCGATG CACCCGAAAA AGCCGCAGCA TATCCTCAGG GAGTATTGCC GGTTATCAGC
GTCGGAGAGC CATCCTCTCC TCTGCAGCCG GGCACCATCA GTGCCGAAGC AGGCCGGCTC
TCAATGCTTG CAATTGAAAA AGCGGCCAAT CTCTGCCTTG AAGGACGCTG TGCGGCTATG
GTGACCGCCC CGATTCACAA AGAGGCCGTT GCCAGAGCAG GCTATCCCCA TACCGGTCAC
ACCGATTTTC TCGCCGACCT GTGCGCAACA GATAATCCGA CCATGCTCTT CAGAGACCCT
GTATCAGGAC TGATGGTCGC TCTGGCGACA ATTCACGTGG CGTTGCATAG AGTCCCTGAA
CTGATCAGAT CTATGGATAT GAGCGCGTTC TTCAGCAACC TCAACCGCTC ACTTCAGTCA
GATTTCAGAA TTGAGCAGCC CAGGATCGCG GTTCTCGGAC TCAACCCCCA CGCCTCTGAC
GGCGGGGTCA TGGGCAGGGA AGAAAAAGAG ATCATTCTTC CATGCATTGA CGCGCTCGCA
GACAGACAGA ATATTGAAGG TCCTTTTGCC GCTGATGGAT TTTTCGGGTC AGGGAAATAC
AGGAACTACG ATGTCACTGT CGCCATGTAT CATGACCAGG GACTGCTTCC ATTCAAAGTA
CTGGCATTCG ACACCGGTAT CAACGTCACG CTCGGCCTCC CTCTTGTCAG GACATCACCC
GATCACGGCA CAAGTTTCGA CATTGCAGGC CAGGGCAGGG CATCACACCG AAGCTTCAGC
GAAGCGGCAA AACTGGCTTG GGAAATTGCG TTCAACCGCC TCATGGAGCA CTCATAG
 
Protein sequence
MKTTAWTIGD IHGIGPEIIL KTFDESLRST GQPEEKPIVI GSAEALLYYS KRLGLSIDIR 
TIDAPEKAAA YPQGVLPVIS VGEPSSPLQP GTISAEAGRL SMLAIEKAAN LCLEGRCAAM
VTAPIHKEAV ARAGYPHTGH TDFLADLCAT DNPTMLFRDP VSGLMVALAT IHVALHRVPE
LIRSMDMSAF FSNLNRSLQS DFRIEQPRIA VLGLNPHASD GGVMGREEKE IILPCIDALA
DRQNIEGPFA ADGFFGSGKY RNYDVTVAMY HDQGLLPFKV LAFDTGINVT LGLPLVRTSP
DHGTSFDIAG QGRASHRSFS EAAKLAWEIA FNRLMEHS