| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0628 |
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| Symbol | |
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| ID | 6459578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 670345 |
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| End bp | 671007 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642724627 |
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| Product | putative conjugal transfer protein TraF |
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| Protein accession | YP_002015330 |
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| Protein GI | 194333470 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAAGC TAAGCGCCTT TCGCGGTCTG TTTTTCGCCC TGTTCGTGAC CTGCCTTTTC
GCGATTGGAG CGACCTTTTT CGCGCGGCCT CTCATCATCT ACAACGCCAC GGACAGCCTT
CCACACGGCC TCTATCTGGT CGTCCAAAAA CCGGATTATG AACGTGGTGA TCTGGTTGCG
TTTCCGGTTT CCGAATCGGT CAAGGCTCTG GTCAGACAAC GCCGATGGCT TCCGGATGGC
GCGTATCTCA TCAAGTCGAT TGCCGGTACA AACGGTGATC TTCTGAGCAC GAAAACCGTT
CGATGTTTCG TCAATGGAAG AGACTTCGGG GCGGTTGAAA CCGTTGATCG AACCGGCCAG
CCGCTGCCCG TTTTTTCGAT CAACCGACGG CTTCAAAATG GAGAAGTCGC CGTCCTCAAT
CCATCTTCCC GCAGCTTTGA TTCGAGGTAC TTCGGGCCGA TTAAAGAGCG GCAGTCGAGT
CACCCCGGGG AACCACCCCC CGGGGTGCTC ACAGATACGG ACGTGAACCT CTCAGCTCAT
CCGGCTCCTC CTATCCAGCC TACCCATACA GCAATGGCCA ATGGGCAAAC ATTCGAGTGT
TCCGTCGGGC TATGCTCTCC AACACATGCG TTGCCCGGCG TCGGTGACCT TTCAACCTTT
TGA
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| Protein sequence | MPKLSAFRGL FFALFVTCLF AIGATFFARP LIIYNATDSL PHGLYLVVQK PDYERGDLVA
FPVSESVKAL VRQRRWLPDG AYLIKSIAGT NGDLLSTKTV RCFVNGRDFG AVETVDRTGQ
PLPVFSINRR LQNGEVAVLN PSSRSFDSRY FGPIKERQSS HPGEPPPGVL TDTDVNLSAH
PAPPIQPTHT AMANGQTFEC SVGLCSPTHA LPGVGDLSTF
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