Gene Paes_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0621 
Symbol 
ID6459245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp666020 
End bp666760 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content40% 
IMG OID642724620 
ProductABC transporter related 
Protein accessionYP_002015323 
Protein GI194333463 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCCA TTGTATCGGT ACATAAGAGT TTCGATGAAG TCCCGATATT AGATGAATTA 
AGCTTTGATG TTAGTTTAAA TTCTATATGT GCAATAGTTG GGCCAAGTGC TTGCGGGAAA
TCGACTATTT TAAACCTGAT ATGTGGCTTA GATCAACTGG ATTTCGGAAA AATATCTATG
CCTGCGAGCA ACACAATTGG CTATATGATG CAAGAACCTA TGTTATTGCC ATGGAGAACT
CTAGAGGAAA ACGCAACACT TGGAGCTGAG GTCAAAGAAA TAGTTGCTAG CAGTGAGGTT
GATGTCGGCG TATATTTCAA TAATGTCGGA CTTGCACTGG ATCGCCTGAA ATATCCGATC
ACGGCGTCTG GTGGCATGAA GCAAAGAGTT GCGCTTGTAC GCACATTGCT GTTAAAGACG
AACATACTAC TTCTTGATGA ACCTTTCTCT AGCCTTGATT TCGACATCAA ATTAAAAGTA
CAGAAATTTT TGTTGAAACA ACAGGCTGAA CTAGGTAGTA CAATTATTTG GGTCACTCAC
GATATTGAAG ATGCGATTGC GATTTCCGAC CGGGTCGTTG TCTTGTCTGA TAAACCTGCC
AAGGTTAAAT CTATAATTGA TATTGATTTA CACGAAAACA AACGCAGCCC GGTAGAGGCG
CGAAAGTCAC TAAAGTTTCG AGATTATTTC TCGGCAATAT GCGAACAATT GAAGTATCTG
GATAATGGTG ATAACGACTG A
 
Protein sequence
MISIVSVHKS FDEVPILDEL SFDVSLNSIC AIVGPSACGK STILNLICGL DQLDFGKISM 
PASNTIGYMM QEPMLLPWRT LEENATLGAE VKEIVASSEV DVGVYFNNVG LALDRLKYPI
TASGGMKQRV ALVRTLLLKT NILLLDEPFS SLDFDIKLKV QKFLLKQQAE LGSTIIWVTH
DIEDAIAISD RVVVLSDKPA KVKSIIDIDL HENKRSPVEA RKSLKFRDYF SAICEQLKYL
DNGDND