Gene Paes_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0620 
Symbol 
ID6459091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp664493 
End bp666016 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content39% 
IMG OID642724619 
Productnucleotide-binding protein containing TIR -like protein domain-like protein 
Protein accessionYP_002015322 
Protein GI194333462 
COG category[K] Transcription 
COG ID[COG4271] Predicted nucleotide-binding protein containing TIR -like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAA TGATCCACCA TGCATATAAT GGCCTCCTCT ATGCACCCCT GTTTTTGGCC 
GATGAATTGG GTCTTCTTCC AAACGATTCA AATTTGAACT ATACAGGGAG CGATGAAGAT
TGTCTGAAGG CCTTATGCAG CAACGATAAT AAAGTGCAAA ACTGGTTTGC AATTTGCGAC
CCGTCTTCAG TGGAAGATAT CAATCGCTAT GTCCCTCAAG GCGATGATTT ATGTGTAATT
GGATGCCTTG TAAATAAATT GCCAGTCTGG GCTGTTAACA AGAATTCAAA TGTTTATCAC
GTAAGAAATG AATGTGAACT CAAAAGATAT GATAATATAT TGCAAACCAT CTGCTGTTAC
CCTGAAGGCA CGACAGGCCA CTTGATCGGG AAGCGATTAA ATCAAGATAT TTTCAAGCGA
TCTAAAATAG AGCCAAAACC ATTTGGTGAG GAATTTTATA ACTTGAAAAA TAATAAAATA
CTTGTTCTGA CGTCAGATAT ATTTCATATT GTTCGCTATG ATCGAGATGA TCACAATGAT
ATTGTTTTTG ACTATACACT CGATAGTCCA CAAGAACTTT CCCCTTTTTT ATTTACAGGT
ATTTTGACCT TAAAAGATAA AGTGTTAGAT GAAAATCTCT GGGCAGCTGT AAATTTATTA
ACCGGAATTA AAAGAGCAAT CCAACTGCTC AAAAGATCGC CTGATAGGGA GACGTATATT
GATATATTAC TTAGAGAGCC TCGAAATTTT CGAGAGTTCG GAAAGGCTCG AGAGAGTTAC
AGAACTCAAT TGAAGAAAAT GGGTGTTATG GGTGAAAAGG ATCAAAAAGA AATAATTAAG
AATTCGCTTG ATTTTATCTT TGAGGACAAA AGAAGGATAT ATAATGAAGA CCTCATGCCT
GATTCTATAG CATGGGACAA AGCGCAAAGA CAGTGGGAGT CAATCGAGGG CCGGCAGAAG
GTAAGTACAC AAATTAAAGA GGAGCCAATT CCTTCGCTAC TAATACAACG TGGTTGGAGG
GCGGATATAA AATTGCACAA AGCAATAAAA CTTTGTAATA ACGCCGTTCC CATTTCTACT
AAGAAAGTAT TTGTCGTTCA CGGGCACAAC GTGGATGCCA GAGATGCTAT TGAAAAATAT
CTTGAAGACT TAGATCTCGA ACCCATCACT ATTGCCAAAC AACCCCATGA AGGACAAACA
ATCATTGATA AATTCACATC CAATGCTGAC GTAGCCTTTG CTATTGTTCT GCTTACAAGC
GACGACAATT GTACAGAGAA TCATAACGGA AGTTCCCCAC GGCTAAGGGC CAGGCAAAAC
GTAATTTTTG AGCTTGGTTT CTTTTTGGGG CGACTGGACA AAAAGAATGT CGCCATGTTG
ATCAAGGGAG ATATTGAAAA ACCATCTGAC ATCGAAGGTA TTGGTTTTAC TGTGATGGAG
GATAATGGGG CATGGAAATC AAAATTGGCA GATGAGATGA AAGCTGCCGG ATTGAACATC
GACAAGAATA AAATAAAAAT ATAA
 
Protein sequence
MTIMIHHAYN GLLYAPLFLA DELGLLPNDS NLNYTGSDED CLKALCSNDN KVQNWFAICD 
PSSVEDINRY VPQGDDLCVI GCLVNKLPVW AVNKNSNVYH VRNECELKRY DNILQTICCY
PEGTTGHLIG KRLNQDIFKR SKIEPKPFGE EFYNLKNNKI LVLTSDIFHI VRYDRDDHND
IVFDYTLDSP QELSPFLFTG ILTLKDKVLD ENLWAAVNLL TGIKRAIQLL KRSPDRETYI
DILLREPRNF REFGKARESY RTQLKKMGVM GEKDQKEIIK NSLDFIFEDK RRIYNEDLMP
DSIAWDKAQR QWESIEGRQK VSTQIKEEPI PSLLIQRGWR ADIKLHKAIK LCNNAVPIST
KKVFVVHGHN VDARDAIEKY LEDLDLEPIT IAKQPHEGQT IIDKFTSNAD VAFAIVLLTS
DDNCTENHNG SSPRLRARQN VIFELGFFLG RLDKKNVAML IKGDIEKPSD IEGIGFTVME
DNGAWKSKLA DEMKAAGLNI DKNKIKI