Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0620 |
Symbol | |
ID | 6459091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 664493 |
End bp | 666016 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 642724619 |
Product | nucleotide-binding protein containing TIR -like protein domain-like protein |
Protein accession | YP_002015322 |
Protein GI | 194333462 |
COG category | [K] Transcription |
COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATAA TGATCCACCA TGCATATAAT GGCCTCCTCT ATGCACCCCT GTTTTTGGCC GATGAATTGG GTCTTCTTCC AAACGATTCA AATTTGAACT ATACAGGGAG CGATGAAGAT TGTCTGAAGG CCTTATGCAG CAACGATAAT AAAGTGCAAA ACTGGTTTGC AATTTGCGAC CCGTCTTCAG TGGAAGATAT CAATCGCTAT GTCCCTCAAG GCGATGATTT ATGTGTAATT GGATGCCTTG TAAATAAATT GCCAGTCTGG GCTGTTAACA AGAATTCAAA TGTTTATCAC GTAAGAAATG AATGTGAACT CAAAAGATAT GATAATATAT TGCAAACCAT CTGCTGTTAC CCTGAAGGCA CGACAGGCCA CTTGATCGGG AAGCGATTAA ATCAAGATAT TTTCAAGCGA TCTAAAATAG AGCCAAAACC ATTTGGTGAG GAATTTTATA ACTTGAAAAA TAATAAAATA CTTGTTCTGA CGTCAGATAT ATTTCATATT GTTCGCTATG ATCGAGATGA TCACAATGAT ATTGTTTTTG ACTATACACT CGATAGTCCA CAAGAACTTT CCCCTTTTTT ATTTACAGGT ATTTTGACCT TAAAAGATAA AGTGTTAGAT GAAAATCTCT GGGCAGCTGT AAATTTATTA ACCGGAATTA AAAGAGCAAT CCAACTGCTC AAAAGATCGC CTGATAGGGA GACGTATATT GATATATTAC TTAGAGAGCC TCGAAATTTT CGAGAGTTCG GAAAGGCTCG AGAGAGTTAC AGAACTCAAT TGAAGAAAAT GGGTGTTATG GGTGAAAAGG ATCAAAAAGA AATAATTAAG AATTCGCTTG ATTTTATCTT TGAGGACAAA AGAAGGATAT ATAATGAAGA CCTCATGCCT GATTCTATAG CATGGGACAA AGCGCAAAGA CAGTGGGAGT CAATCGAGGG CCGGCAGAAG GTAAGTACAC AAATTAAAGA GGAGCCAATT CCTTCGCTAC TAATACAACG TGGTTGGAGG GCGGATATAA AATTGCACAA AGCAATAAAA CTTTGTAATA ACGCCGTTCC CATTTCTACT AAGAAAGTAT TTGTCGTTCA CGGGCACAAC GTGGATGCCA GAGATGCTAT TGAAAAATAT CTTGAAGACT TAGATCTCGA ACCCATCACT ATTGCCAAAC AACCCCATGA AGGACAAACA ATCATTGATA AATTCACATC CAATGCTGAC GTAGCCTTTG CTATTGTTCT GCTTACAAGC GACGACAATT GTACAGAGAA TCATAACGGA AGTTCCCCAC GGCTAAGGGC CAGGCAAAAC GTAATTTTTG AGCTTGGTTT CTTTTTGGGG CGACTGGACA AAAAGAATGT CGCCATGTTG ATCAAGGGAG ATATTGAAAA ACCATCTGAC ATCGAAGGTA TTGGTTTTAC TGTGATGGAG GATAATGGGG CATGGAAATC AAAATTGGCA GATGAGATGA AAGCTGCCGG ATTGAACATC GACAAGAATA AAATAAAAAT ATAA
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Protein sequence | MTIMIHHAYN GLLYAPLFLA DELGLLPNDS NLNYTGSDED CLKALCSNDN KVQNWFAICD PSSVEDINRY VPQGDDLCVI GCLVNKLPVW AVNKNSNVYH VRNECELKRY DNILQTICCY PEGTTGHLIG KRLNQDIFKR SKIEPKPFGE EFYNLKNNKI LVLTSDIFHI VRYDRDDHND IVFDYTLDSP QELSPFLFTG ILTLKDKVLD ENLWAAVNLL TGIKRAIQLL KRSPDRETYI DILLREPRNF REFGKARESY RTQLKKMGVM GEKDQKEIIK NSLDFIFEDK RRIYNEDLMP DSIAWDKAQR QWESIEGRQK VSTQIKEEPI PSLLIQRGWR ADIKLHKAIK LCNNAVPIST KKVFVVHGHN VDARDAIEKY LEDLDLEPIT IAKQPHEGQT IIDKFTSNAD VAFAIVLLTS DDNCTENHNG SSPRLRARQN VIFELGFFLG RLDKKNVAML IKGDIEKPSD IEGIGFTVME DNGAWKSKLA DEMKAAGLNI DKNKIKI
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