| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0613 |
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| Symbol | gltD |
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| ID | 6460611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 657384 |
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| End bp | 658859 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724612 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_002015316 |
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| Protein GI | 194333456 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAAAG TTAAAGGCTT TTTAGAGTAT AGAAGAGAGG TTCCCTCCGA CAGGGAGCCT
CTTGAGAGAA TCAAGGACTG GAAGGAGTTC CATGAGCACA TGACGGATGA AGCTCTGGGC
GATCAGGGAG CACGCTGTAT GGATTGCGGG ACACCCTATT GCCACACAGG GTTCATGCTC
AGTGGCATGA CATCAGGATG CCCGATTCAC AATCTGATCC CTGAATGGAA CGACTACGTC
TATAAAGGGT TCTGGCACGA AGCATACGAC CGTCTCATGA AGACCAACAA TTTTCCTGAG
TTTACCGGTC GTGTCTGTCC GGCTCCATGC GAAGGATCCT GTGTTCTTGG CATCATTCAG
CCACCGGTAA CTATCAAGAA TATTGAATGC TCCATCATCG AGCATGCCTT CAAACAGGGC
TGGGTTGAGC CGAAGAAGAT AGCCGTCCGG ACAGGAAAAA AGATCGCCGT TGTCGGCTCC
GGTCCCGCAG GTCTCGCTGC TGCCGATCAG CTTAACAAGG CGGGCCACTC CGTGACAGTC
TACGAGCGTG ACGACCGTAT TGGCGGGTTG CTGATGTATG GTATTCCCAA CATGAAACTC
GATAAAGAGG CCGTTGTGCA GCGTCGTGTC GACCTTATGG AGCAGGAAGG TGTTGTTTTT
GTTGTCAATA CCGAGATCGG CGTTGACTTT CCGGCTGAAA AACTGACCGA AGAGTATGAT
GCTGTTCTGC TTTGTACCGG GGCAACGAGA CCTCGTGACC TCGATGTCGA GGGTCGCAGC
TTGAACGGCG TCCATTTCGC TATGGATTTT CTTCGCGAAA GTACGAAATC CGTTCTCACA
GGCGGGCAGC CTGAAATCTC TGCAAAAGCG TGTGATGTCA TCGTTATCGG GGGAGGGGAT
ACCGGAACCG ACTGCGTGGC TTCATCGATT CGGCAGGGAT GCAAAAGCGT CGTTCAGCTC
GAAATTCTGC CTCAGCCGCC GCTTGAGCGA CAGGCTGACA ATCCCTGGCC CGAATGGCCC
AAAACACTCA AGGTTGATTA CGGGCAGGAG GAAGCCGCTG CACTGCAGGG GGATGATCCC
CGCCGCTATT CGATGATGAC CAAGAAACTT ATCGGGGATG CAGACGGCAA CCTGACCGGT
ATTGAAGTAT CGAAAGTGGA ATGGGTTAAG GACGATGGCC GTTTCATGCC GCGTCCGGTT
GCGGGCACCG AGGAGATTCT TCCCGCACAG CTTGTTCTTC TTGCGATGGG CTTTCTGGGA
CCGGAAGATG GTGCCCTCAA GGCACTTGAG GTTGAACAAA CGGAACGTTC AACGATCAAA
GCCAGTTATG ATGACTTCAG TACCAGCAGG CAAAAGGTTT TTGCTGCCGG TGATGCCAGA
AGGGGACAGA GCCTTATTGT CTGGGCGATC AACGAGGGGA GGGCTGCCGC TCGTGAAGTT
GACCGTTTTC TGATGGGCGA CACCAATCTT CCTTAA
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| Protein sequence | MGKVKGFLEY RREVPSDREP LERIKDWKEF HEHMTDEALG DQGARCMDCG TPYCHTGFML
SGMTSGCPIH NLIPEWNDYV YKGFWHEAYD RLMKTNNFPE FTGRVCPAPC EGSCVLGIIQ
PPVTIKNIEC SIIEHAFKQG WVEPKKIAVR TGKKIAVVGS GPAGLAAADQ LNKAGHSVTV
YERDDRIGGL LMYGIPNMKL DKEAVVQRRV DLMEQEGVVF VVNTEIGVDF PAEKLTEEYD
AVLLCTGATR PRDLDVEGRS LNGVHFAMDF LRESTKSVLT GGQPEISAKA CDVIVIGGGD
TGTDCVASSI RQGCKSVVQL EILPQPPLER QADNPWPEWP KTLKVDYGQE EAAALQGDDP
RRYSMMTKKL IGDADGNLTG IEVSKVEWVK DDGRFMPRPV AGTEEILPAQ LVLLAMGFLG
PEDGALKALE VEQTERSTIK ASYDDFSTSR QKVFAAGDAR RGQSLIVWAI NEGRAAAREV
DRFLMGDTNL P
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