Gene Paes_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0605 
Symbol 
ID6460346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp644358 
End bp646274 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content50% 
IMG OID642724604 
Productprotein of unknown function DUF1704 
Protein accessionYP_002015308 
Protein GI194333448 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0130563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAA GAGTGAGGGA AGCGACAGGT CACACCATCG ATGATGTCGA TATTGCATCG 
GTTATCGCTC GATTGCAGCA GGGAAGGAAG GTACACCTTG ATTTGCCGCT GGGAGGCGTA
CTTCATATCG ATCGTCCTTT GCCGTTTATG GTGCTCTACA GGAAACCTGT GAAGCGCAAC
GATGCCGGGA CGGAGCTCCT GGTAAGGGGA GAAGCCTCCT ATCTGCTTGC ATCCGACAGC
CCGAAGCAGC GCCAGGGGCT TGCGAGTCTG GTCAGGCAGA TCATGAGCAC TCAGAGCGAG
AAGTACAATG CATTTCTCAT TATTGAAATC TGGTCTTCCG GAAAAAGTAC AGCGGACTGC
TGTGACAGCG AACCGGAAGA GCCTCGTTTC AGAGTTATGA CTTCCGGCAG CCGTCCTCCG
ACCTATACGG TCGATGCTCT TGCAAAAGCG CTCAAGTCGG TCAGTGTTCA CAAGAAAAAG
CCGGTTGTCA GCGTTGACCT TGATCAGGGA CGAACGCCCC GTGGACTTTC CCCTCTTCTG
ACGATAGCCG AAACCAGAAA GCTGAACGGC TATTTTATCG GACTTGAGGT CAGCCCGTGT
TTTCGCGATC CTGTGAGCGG AGAGCTCTAC CCGATTGTTT TACGGGCTCT TCACCGTGGA
TTTGCCAGGG CTCTGAAACG TGCTTTTTTT GAGTTTTCTC ATACCCAGAC AACCTATCGC
CCTCTCCATT ATCATGTTCT TGGTCGAAGA GCTGTTGTTC GGTCGGTCTG GGAGGTGGAC
AGGAAACTTG CCGCTATCAG TCGTGCATTT GATCTTATTC TTCAGGCGAC ACCGATCAAT
ATTGAAAAAT CGTGGTCACG CTTCAAGAGT TCTCGCTTCG ATGTGATGCC TGTTCTCTAC
TACCGTCCGT TATCGGTTGA TCCCGAAATA CTCAAACGGG AGCTTTTCGG GATACATATC
GATCGCATAG AAGATCCTAC CCTTGCATTC CTGTTTCGTC AGAAACGCAA GGAACTCGAT
CGGCAGTTAT CAATGCTGCT TGATCGCGGA AAGGAGGATT TTCTTTACGG AAGCCTTCAG
TTGTACGGTC GTGTGGATGA GCCATTGTAT TACAGTGCAC GGCAGCTGCT GGAACGCCTT
GCGCCGCATC GTCAGGATGA GTCGGTTACC GATATAGTGA GTGCAGCCGA TTTTGCTCAA
AGGGCTCATG AGGAGGTTGA ACTCTACAGG AGAGTCTACC CCGATATTTC AAGCACGGTC
CAGATTCGCG ATGACATTAT CGGTTTGATG GTTTCAAAGG GCAACCTGTT TATCGGCAGA
AACAGTCGTG TGTCGCGTTC AAGAATGAAT GCACTGATAG AACATGAGGT AGGTACCCAT
ATTCTGACCT ATATAAACGG GACTTCCCAG CCGTTTCATC AGCTCTATTG CGGTCTTGCA
GGATATGAAG AGCTTCAGGA GGGTCTGGCT GTACTGGCTG AGTATTTTAC TGGCGGTCTG
AGCGGGACAA GAATGAGGCT GTTAGCGGGG AGAGTTATCG CCGCATGGCA GCTGATCGAC
GGGGCGACGT TTGTCGATAC CTATCGAAGC CTCAACCGTG AGTACGGCTT TAACCAGAGA
ACGGCGTATA CCATTGCCAT TCGCATTTTT AGAGCTGGTG GCCTGACCAA GGATGCGGTA
TATTTGCGAG GTCTTATTGA GCTTCTTGAT TATCTGAAAA ATGGAGGAGA TCTTTTTCCT
CTTTTTGTGG GAAAAATAGC GATCGAACAT GTTCCGCTTA TCCGGGAACT GCAATATCGT
GAAGTTCTCA GGATGCCGCC GCTGACGCCG GGTTATTTGG ATCGGTCTGA TTTTATTCCA
AAAATGAATA TGTTAAAAAA GGGTTTGTCA CCAATAGAAC TTGTTGAAAG GAGATAA
 
Protein sequence
MQQRVREATG HTIDDVDIAS VIARLQQGRK VHLDLPLGGV LHIDRPLPFM VLYRKPVKRN 
DAGTELLVRG EASYLLASDS PKQRQGLASL VRQIMSTQSE KYNAFLIIEI WSSGKSTADC
CDSEPEEPRF RVMTSGSRPP TYTVDALAKA LKSVSVHKKK PVVSVDLDQG RTPRGLSPLL
TIAETRKLNG YFIGLEVSPC FRDPVSGELY PIVLRALHRG FARALKRAFF EFSHTQTTYR
PLHYHVLGRR AVVRSVWEVD RKLAAISRAF DLILQATPIN IEKSWSRFKS SRFDVMPVLY
YRPLSVDPEI LKRELFGIHI DRIEDPTLAF LFRQKRKELD RQLSMLLDRG KEDFLYGSLQ
LYGRVDEPLY YSARQLLERL APHRQDESVT DIVSAADFAQ RAHEEVELYR RVYPDISSTV
QIRDDIIGLM VSKGNLFIGR NSRVSRSRMN ALIEHEVGTH ILTYINGTSQ PFHQLYCGLA
GYEELQEGLA VLAEYFTGGL SGTRMRLLAG RVIAAWQLID GATFVDTYRS LNREYGFNQR
TAYTIAIRIF RAGGLTKDAV YLRGLIELLD YLKNGGDLFP LFVGKIAIEH VPLIRELQYR
EVLRMPPLTP GYLDRSDFIP KMNMLKKGLS PIELVERR