Gene Paes_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0588 
Symbol 
ID6459855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp628829 
End bp629632 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content49% 
IMG OID642724587 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_002015291 
Protein GI194333431 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.38391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.963461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCA ATGCGGCAGG CAGCTTTTTT TCAATACGGT TAAACAGAAT TACCACTATG 
AAACAGGGTT TATTTACCGC AATCCTGATC GCGATCACCT ATGCTGTTTC CCTGAGCTTT
TATGTCTGGA TGGGCACGAC CTCTCCGGAT TCGATGTTTC ACGCAGTCTA TAAGGGAGGC
CCTGTCGTTT CTGTGCTAAT GGCACTGATC CTGATGGTGA TCGCCTACAT TGTCGAGCGA
ATCATTGCGC TCAACAAGGC GTCGGGAAAA GGAAATATTG CGGAGTTTGT CAAAAGCCTT
AAATCGGATG TCGATAACGG GCAGATCGAT TCGGCTATTT CAAAATGCGA TGATCATCAG
AGTTCTCTTG CAGCAGTGAT GCGGGCCGTG TTCGAGCGAT ACAAGATGCT ATCTATTCAC
AGCGTTACCG ACAGGGAAAA GAAGATCAGC GAGATGGAAA AAGCGGTAGA GGAGGCGACC
ATCATGGAGA TGCCGCTGCT CGAGAAAAAT CTTGTAGCGA TATCTACGAT TGCCTCTATT
TCAACGATGG TGGGTCTTCT CGGGACGACC ATGGGTATGA TCCGGGCGTT TACCGCGATG
GCAACCAGCG GAGCCCCTGA TGCGGTCCAG CTGTCTTTGG GTATTTCAGA AGCACTGTTC
AATACGGCAC TGGGTATTTT TGGCGGGATT ATCGGGATTG TCACCTACAA TATTTTCACC
CACAAAGTGG ATGCGTTTAC CTATGTGATC GATGAGGCGG CATTCTATAT TATACAGACG
CTCGGGTCCG CTAAATCAGA GTAG
 
Protein sequence
MQRNAAGSFF SIRLNRITTM KQGLFTAILI AITYAVSLSF YVWMGTTSPD SMFHAVYKGG 
PVVSVLMALI LMVIAYIVER IIALNKASGK GNIAEFVKSL KSDVDNGQID SAISKCDDHQ
SSLAAVMRAV FERYKMLSIH SVTDREKKIS EMEKAVEEAT IMEMPLLEKN LVAISTIASI
STMVGLLGTT MGMIRAFTAM ATSGAPDAVQ LSLGISEALF NTALGIFGGI IGIVTYNIFT
HKVDAFTYVI DEAAFYIIQT LGSAKSE