| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0582 |
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| Symbol | |
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| ID | 6460502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 621428 |
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| End bp | 623284 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642724581 |
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| Product | Carbamoyl-phosphate synthetase large chain domain protein |
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| Protein accession | YP_002015285 |
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| Protein GI | 194333425 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000594141 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.448613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACAC CAGCTCATGA CCTGCCGAGC GACGTCCTCA GCCTGGCCCG CAAAATATCC
AGAGAACAAC TCCTGAAAGC CAAGGAAAAT GGTTTTTCTG ATTTCCAGCT CGCCAACATT
TTCAATGCGA CCGAGCCGGA TATCCGTATG CTCAGAAAGC ATTACGGTGT GGAATCGGTT
TTCAAAACCG TCGATACCTG TGCAGCAGAG TTCGACGCAT CAACACCCTA TCACTACTCG
AGCTACGACG ACGAAAACGA GTCTGTCCGT TCGGACAACA AGAAAGTCAT CATTCTCGGC
GGCGGACCGA ACCGGATCGG TCAGGGCATC GAGTTCGACT ACTGCTGTGT TCAGGCGGTC
TTCGCCCTCA GAGAAGCCGG GTATGAAACC ATCATGGTCA ACTGCAATCC TGAAACCGTT
TCGACCGACT ACGATATTGC CGACAAGCTG TATTTCGAGC CTCTCACCTT TGAAGATACT
ATCCGCATCA TCGAACACGA GGACCCCCTC GGCGTCATCG TGAGCTTTGG AGGCCAGACC
CCGCTGAAAC TCTCATCAAA GCTTGAAGAA GCCGGCGTTA CCATTCTGGG AACATCATCG
AAAGGCATTG ACCTTGCCGA AGACAGAAAA AAGTTCGGGG CCGTGCTGCG AGAACTCAAC
ATTCCGCATC CCGATTACGA TACCGCGATC AGCTACGAGG AAGCCCAGGA AATAACCCGC
AGGATCGGCT ACCCAGTACT TGTCCGCCCA AGTTATGTTC TTGGCGGGCG GGCCATGAAA
ATCATCTACA GCGATGACTC ACTCAAAGAG TATGTCGACC AGGCGCTGTT TATCACTGAA
AAGTATCCGT TGCTCATCGA CAGGTTCCTC GAAACTGCGG TAGAGTTTGA CATCGATGCC
ATTGCCGACA CGACGGACTG CGTTGTCAGC GGCATCATGC AGCATGTCGA AGCGGCAGGT
ATCCACAGCG GAGACTCGAC ATCCATTCTC CCCTATCATA ATATCAATCC CGAGGTCATC
AAGACCATGA AGGAGTACAC CCGAAGACTG GCCGAAAGAA TAGGCGTCGT CGGGCTCATG
AATGTCCAGT ATGCCGTCCA GAACGACAGC GTCTACGTCA TCGAAGTCAA CCCGCGCGCC
AGCCGTACGG TTCCGTTTGT CGGTAAAGCA ACCGCCATTC CTGTCGTCAA AATAGCAACA
CGGGTCATGC TGGGAGAGAA ACTTTCAGAT CTGCGCAAAG AGTATCGTCT GGCCGACTGT
GACGAGCTTG GCATGAACCA CCTTGCCATC AAGGAACCGG TATTTCCTTT CTCGAAGTTC
GTCAAATCAG GCGTCTATCT TGGTCCGGAA ATGCGCTCGA CAGGTGAAGC AATGAGCCTT
GCCTATAATT TCCCTGAAGC CTTTGCAAAG GCTTACCAGG CAGCCAACAT GGAACTGCCG
ACATCAGGAA CAGTTTTCAT CAGCGTCAAT GACCACGATA AAGATGAGAG AATTATACGC
ATCGCAAAAG ATCTCTACCG TATAGGATTT GATCTGGTTG CCACCTCAGG CACGCAGCAA
TATCTGATAG AGCACGGTAT CGAATGCAAA AAAGTCTATA AAGTCGGAGA AGAAGGTCGG
CCCAACATCT TTGATACAAT ACGTCTGGGC AAAATCGACT TTGTCATCAA CACGCCTCTG
GGTGAGCGGG CACTGAACGA CGAAGAAGCA ATAGGTGCCG CCTCGGTCAC AAGCGGAGTC
CCATTTGTCA CGACCATAGA AGCCGCCGAA GCATCAATTC AGGCGATCGA CTGCCTCAGA
CAACAAGAGT TTGGCGTCAA GAGTCTTCAG GAATACGCCA GTTACCGCAA TCAGTAA
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| Protein sequence | MITPAHDLPS DVLSLARKIS REQLLKAKEN GFSDFQLANI FNATEPDIRM LRKHYGVESV
FKTVDTCAAE FDASTPYHYS SYDDENESVR SDNKKVIILG GGPNRIGQGI EFDYCCVQAV
FALREAGYET IMVNCNPETV STDYDIADKL YFEPLTFEDT IRIIEHEDPL GVIVSFGGQT
PLKLSSKLEE AGVTILGTSS KGIDLAEDRK KFGAVLRELN IPHPDYDTAI SYEEAQEITR
RIGYPVLVRP SYVLGGRAMK IIYSDDSLKE YVDQALFITE KYPLLIDRFL ETAVEFDIDA
IADTTDCVVS GIMQHVEAAG IHSGDSTSIL PYHNINPEVI KTMKEYTRRL AERIGVVGLM
NVQYAVQNDS VYVIEVNPRA SRTVPFVGKA TAIPVVKIAT RVMLGEKLSD LRKEYRLADC
DELGMNHLAI KEPVFPFSKF VKSGVYLGPE MRSTGEAMSL AYNFPEAFAK AYQAANMELP
TSGTVFISVN DHDKDERIIR IAKDLYRIGF DLVATSGTQQ YLIEHGIECK KVYKVGEEGR
PNIFDTIRLG KIDFVINTPL GERALNDEEA IGAASVTSGV PFVTTIEAAE ASIQAIDCLR
QQEFGVKSLQ EYASYRNQ
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