Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0576 |
Symbol | |
ID | 6458495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 618000 |
End bp | 618719 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642724575 |
Product | iron (metal) dependent repressor, DtxR family |
Protein accession | YP_002015279 |
Protein GI | 194333419 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.168469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.566228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGGC GGTTAGGTGT TATCAAGGGC GAGACGCTTG GCGAGTCAAA TGATATGTAT CTTCTGACCG TGTTTCGTTT GGTGGAGCGT GGTGGAGAGG TTTCAATCAG CCATCTTGCC GAAGCGACTG GTCACAGCAT GTCGACCGTT TCGGAAAAAG TGAGACGGCT TACCCGGAGA GGCTATCTTT TACATGAGTG GCGTGGAGCG GTAACATTAA GCGCAGAGGG TTGGCGTTAT GCGGGCAGGT TGTTGAGAAA ACGCCGGCTC ATTGAGACTT TTCTTGTTTG TCAGGCCGGT TACAACGTGT ATGATGTGCA TGTTGATGCA TGCCGTCTTG AGCATGTGAT CTCGGATAGG TTGACCGATG CGCTTGAACG GATGCTTGAT TATCCCCGTC ATGATCCTCA TGGTCATCCC ATCCCGGATA AGGAAGGAGT TATTAGCGCT GCATATACGG TTTCTCTCAC TGTGCTCGAT GAAGGATGTC ATGCTGAAGT GGTGTCACTC AATAGCGAAG ATATGGAGCG GTTGAAGTAC CTTGATGAAC TGGGCTTCAG TCCGGGAGTT ACTTTTCGTC TTCTGCATAA GGCTCCTTTT GACGGTCCTC TTACTATCGA CATGAACGGT TATTGTTTTT CTCTTGCGCT ATCTCTGGCA TCCTCCATTG ACGTTGTGGT TCAGAAAGAT TTGTCGTCTG GAACAAATGG CATGTCATAG
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Protein sequence | MDGRLGVIKG ETLGESNDMY LLTVFRLVER GGEVSISHLA EATGHSMSTV SEKVRRLTRR GYLLHEWRGA VTLSAEGWRY AGRLLRKRRL IETFLVCQAG YNVYDVHVDA CRLEHVISDR LTDALERMLD YPRHDPHGHP IPDKEGVISA AYTVSLTVLD EGCHAEVVSL NSEDMERLKY LDELGFSPGV TFRLLHKAPF DGPLTIDMNG YCFSLALSLA SSIDVVVQKD LSSGTNGMS
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