Gene Paes_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0545 
Symbol 
ID6459239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp587009 
End bp588001 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID642724544 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_002015248 
Protein GI194333388 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.659162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.856578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTC GCAACGCAGT CAACAGTAAG CCCGAACAGC ATCTTCGCTC GCAGCTCCTT 
TCCTCCGGAG TCAGTTCGGC GAGAGAAAAA GTGATACAGC AGGCACTGGA TAATGTCAAC
AGGCCGGGGT TCAAAATAGA ACCGTCTGCG ATCCTTCCCC TCATGAAACC GGTCACCTGG
TTCCCTCCGA TGTGGGCATT TGCCTGCGGA GTGGTATCCA CCGGTGAAGA TATCAGCTCA
AACTGGTCCA TTCTGCTTCG AGGCATCATC CTGGCAGGCC CGCTGATGTG CGCCATGTCG
CAGACCATGA ACGACTACTT CGATCGCGAA GTTGACGCCA TCAATGAACC AGAAAGACCT
ATTCCTTCGG GAAAGATTTC TAAACAGGCC AGCTGGCTCA TCACCTTCGG TCTGATCATG
ACCGGCTTTC TGGTCGCATG GTCAATTCAT CCCTATGTCA TGATTATCGC TTTCGTCGGC
GTACTCATGT CGCATGCCTA TTCCGGTCCG CCCCTGCGGG CAAAAAGAAA CGGCTGGTTC
GGCAACCTCA TCGTCGGGCT CGCCTATGAA GGAGTTGCGT GGCTGACGGG AAGCTTTGCC
ATCACCCAGG GGGTCCCGGC TGCGGAATCA ATCGCACTGG CTGTCATTTT TTCAATCGGG
GCTCATGGAA TCATGACCCT GAACGATTTC AAATCCGTTG TCGGCGACAC CATCCGAAAA
GTCGCATCCA TACCCGTTCA GCTCGGCGAA AAAAAGGCAG CTGTTCTTGC CTCTGTCATC
ATGGATATCG CCCAGCTTGC CGCGATCAGC ATTCTTCTCT ACAAATCGTC GTACATCACA
TCGGGTATCG CTATACTGCT GCTCCTTCTG CAGCTGCCTA TGCAGAAAAT CCTTGTCGAT
AACCCCAAGG AAAAGGCTGT CTGGTACAAT GCATTCGGAA CCCTGCTCTA TGTGCTTTCA
ATGATGGTCT GCGCTGTAGG AATCAGGCCA TGA
 
Protein sequence
MNGRNAVNSK PEQHLRSQLL SSGVSSAREK VIQQALDNVN RPGFKIEPSA ILPLMKPVTW 
FPPMWAFACG VVSTGEDISS NWSILLRGII LAGPLMCAMS QTMNDYFDRE VDAINEPERP
IPSGKISKQA SWLITFGLIM TGFLVAWSIH PYVMIIAFVG VLMSHAYSGP PLRAKRNGWF
GNLIVGLAYE GVAWLTGSFA ITQGVPAAES IALAVIFSIG AHGIMTLNDF KSVVGDTIRK
VASIPVQLGE KKAAVLASVI MDIAQLAAIS ILLYKSSYIT SGIAILLLLL QLPMQKILVD
NPKEKAVWYN AFGTLLYVLS MMVCAVGIRP