Gene Paes_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0531 
Symbol 
ID6460291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp572597 
End bp576151 
Gene Length3555 bp 
Protein Length1184 aa 
Translation table11 
GC content53% 
IMG OID642724530 
Productpyruvate flavodoxin/ferredoxin oxidoreductase domain protein 
Protein accessionYP_002015234 
Protein GI194333374 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGA CTTTTAAGAC ATTAGAAGGC AATGAAGCAT TGGCGCACGT CGCCTATCGC 
ACCAACGAGG TTATCTCGAT ATATCCTATC ACGCCGGCCT CGAACATGGG CGAATATTCA
GATGCATGGG CAGCTGAAGG GAAAAAAAAT ATCTGGGGCA GCGTTCCTCT TATTGATGAA
ATGCAAAGTG AAGCCGGTGC CATCGCCGCG GTTCACGGTG CCGTGCAGAC CGGCGCACTG
TCGACCACCT TTACCGCGTC ACAGGGGCTT CTGCTCATGC CTCCGACCAT GTACAAAATT
GCAGGTGAGC TCAGCCCCTG CACCATCCAC GTCTCTGCAC GCTCAATAGC AGCTCAGGCG
CTCTCAATTT TCGGTGACCA CGGTGATGTC ATGTCGGTTC GCGGAACAGG TTTCGCACTG
CTCTCTTCAT GCTCCGGCCA GGAGGTCATG GACCTTGGGC TCATCGCCCA GGCAGCCACC
CTGAAATCGA GAATACCCTT CCTGCACTTC TTCGACGGCT TCAGAACGTC ACACGAAATC
ACCAAAATCG AGGTTCTTTC GGACGACGAC ATCAGAAGTA TGATCGACGA CGATCTCGTC
ATCGCCCACA GAAACCGCCG CATGTCGCCT GACGCACCAA TCATCAGGGG AACATCGCAG
AACCCGGATG TCTACTTCCA GGGTCGCGAA ACCGTCAACC AGTTCTACGA TGCCTGTCCC
GACATTGTCG AAGAGTATAT GGAGCGGTTC AAAGAACTGA CCGGGCGCGA ATACAAACTC
TACCAGTACT ATGGTGCTCC CGATGCCGAA AGGGTCATCG TCATGATGGG ATCAGGTGCC
GAAACAGCAC TCGAAACCGT CAACTATCTC AATACACAGG GTGAAAAGGT CGGCCTGATC
AAAGTCCGCC TCTACAGACC GTTTGACATC AAACGCTTCC TGAAAGCCCT GCCATCGACC
GTCAAGGCCA TCGCCGCACT CGACCGTATG AAAGAACCCG GCAGCGCAGG CGAACCCCTC
TATCTCGATG TCGTCAACGC TATTCATGAA GGCCTTCACG ACAAGATCAT CTCCTTCGAT
CCCGCTATTG TCGGCGGTCG CTACGGCCTG TCGTCAAAGG AATTCACTCC GGCAATGGTC
AAGGCGATTT TCGACAACAT GGCACAGGAG AATCCGAAAA GCCATTTCAC CGTCGGCATC
AACGACGACG TGATGCACAC AAGCCTTGAT TATGACGAAT CATTCTGCAT CGAGCCGGAT
GAAGTCTTCC GGGCCATGTT CTACGGTCTG GGCTCAGACG GAACGGTCGG CGCCAATAAA
AACTCGATCA AGATCATCGG CGAGAATACA GACAACTACG CCCAGGGCTA CTTTGTCTAC
GACTCGAAAA AAGCCGGTTC CATCACCGTT TCGCACCTGC GTTTCGGACC AAACCAGATT
CATTCGACCT ATAAAATTTC CAGAGCCCAG TTCATCGGCT GCCACCACTG GATCTTCCTC
GAATCGATCG ATCTTGTCAA GAACCTCAAA GAAGGCGGAA CCCTCTTGAT CAACTCCCAC
TTCACCAAAG AAGAGGTATG GGATCAGCTC CCGAAACTTG TGCAGCAGCA CCTGATCGCC
AAAAAAGCGA AGCTCTACAC CATCGACGCC TACAAGGTAG CCCACGACAG CAAAATGGGT
CAGAGGATCA ACACCATCAT GCAGGCCTGC TTCTTTGCCA TCTCCGGCGT GCTTCCCAAA
GGAGAAGCCA TCGAGAAAAT CAAGGAGTCG ATCCGCCAAA CCTACGGCAA GAAAGGTGAC
AACATCGTCA ACCAGAACAT TCAGGCTGTC GAGAACACCC TCTCGAACCT TCATGAGGTT
GCAATCGGTT CTGTAGCCAA AAGCAAAAAA CAGATGAGGC CGCCAATTTC AGGCGAAGCT
CCTGAATTCG TCTGCAACAC CCTCGCTCAG ATCATTGCCG GCGACGGTGA CCATATTCCT
GTCAGCCAGA TGCCCGTAGA CGGCACCTTC CCGGTAGGAA CATCCAAATT CGAAAAACGC
AATCTTGCAC AGGAAGTCCC GGTCTGGGAA CCCAGTCTCT GTATCCAGTG CGGAAAATGC
TCCATGGTCT GTCCGCACGG CGTCATCCGC TGTAAAGCAT ACGATCCGAA ATACCTTGCC
AACGCACCGA CCACCTTCAA GTGCAGCGAT GCCAAAGGCA AAAACTGGAC AGGTCTGAAG
TATACCATAC AGGTCTCCGT CGAAGACTGT ACAGGCTGTG AAATCTGCGC GCACATCTGC
CCTGCAAGGG ATAAACAGAA CCCGGAACGC CACGCACTGA ACATGAGCCC CCAGGAACCG
CTTCGCGAGA ATGAAGTCGA TAACTGGAAC TATTTTGTTC ATATCCCTGA ATTCGACCGC
TCCAAAATCA ACATCAAGCT GATCAAAGAG CAGCAGCTCC AGCAGCCGCT CTTCGAATTC
TCAGGTGCCT GCGCCGGCTG CGGAGAGACG CCGTATGTCA AACTCATGAG CCAGCTCTTC
GGCGACCGCC TGGTCCTCGG CAACGCAACC GGATGTTCAT CCATCTACGG CGGCAACCTG
CCGACAACGC CCTACTGCAC CAACGCAGAC GGCCTCGGAC CAACATGGTC GAACTCTCTG
TTCGAAGACA CCGCAGAGTT CTCGCTCGGC TTCAGAATTT CGATCAACAA ACAAAAAGAG
TATGCAGAAG AACTCGTAAA GCTGCTCTCG ACCGAAATCG GCGAAACACT CGCAACGGAG
CTCCTCGAAG CCAGTCAACA CTCTGAACCC GAAATCTTCG AACAGCGCAA GAGGGTCAAA
ACTCTTAAAG AGAAACTGGC TCTCATAGAC CGCCAGGAAG CGAAAAATCT CTTAGCCATC
GCAGACATGC TCGTCAAGAA GAGTGTCTGG GCGATCGGCG GCGACGGTTG GGCCTACGAT
ATCGGTTACA GCGGCGTTGA CCATGTCACC GCGTGCGGAG AAAACGTCAA CATGATCGTT
CTGGACACCG AGGTATACTC CAATACCGGA GGCCAGGCAT CCAAAGCGAC CCCGAAAGCA
GCCGTAGCAA AGTTTGCAGC AGCAGGAAGG CCGATCACCA AAAAAGATCT CGGCATGATC
TCGATGACCT ACGGCAATGC CTATGTCGCA AGCATCGCAA TGGGAGCCCG CGACGAGCAG
ACACTCAAAG CGCTTATCGA AGCAGAAGCC TACGACGGGC CGTCAATTGT CATCGCCTAC
TCGCACTGCA TCGCACACGG TATCAGCATG GAGAATGGCA TGGAGCAGCA GAAACTTGCC
GTTGACTCCG GTCACTGGCT CCTCTACCGC TACAATCCCG AGAGGCTGAA AGAAGGAAAG
AATCCGCTGA TTCTCGACTC CAAGAAACCC AAAATCCCGG TCGAGCAGTT CCTGAACACG
GAAAACCGTT TCCGCATGCT CAAGAAAAGC CATCCGGACA TGGCAAAACA GTACTTCGAA
GCCATTCAGA AAGAGGTCGA CGCACGGTAT GCCACCTACG AATACCTCGC AGCAAGAAAA
TACCCGAACG ACTAA
 
Protein sequence
MSRTFKTLEG NEALAHVAYR TNEVISIYPI TPASNMGEYS DAWAAEGKKN IWGSVPLIDE 
MQSEAGAIAA VHGAVQTGAL STTFTASQGL LLMPPTMYKI AGELSPCTIH VSARSIAAQA
LSIFGDHGDV MSVRGTGFAL LSSCSGQEVM DLGLIAQAAT LKSRIPFLHF FDGFRTSHEI
TKIEVLSDDD IRSMIDDDLV IAHRNRRMSP DAPIIRGTSQ NPDVYFQGRE TVNQFYDACP
DIVEEYMERF KELTGREYKL YQYYGAPDAE RVIVMMGSGA ETALETVNYL NTQGEKVGLI
KVRLYRPFDI KRFLKALPST VKAIAALDRM KEPGSAGEPL YLDVVNAIHE GLHDKIISFD
PAIVGGRYGL SSKEFTPAMV KAIFDNMAQE NPKSHFTVGI NDDVMHTSLD YDESFCIEPD
EVFRAMFYGL GSDGTVGANK NSIKIIGENT DNYAQGYFVY DSKKAGSITV SHLRFGPNQI
HSTYKISRAQ FIGCHHWIFL ESIDLVKNLK EGGTLLINSH FTKEEVWDQL PKLVQQHLIA
KKAKLYTIDA YKVAHDSKMG QRINTIMQAC FFAISGVLPK GEAIEKIKES IRQTYGKKGD
NIVNQNIQAV ENTLSNLHEV AIGSVAKSKK QMRPPISGEA PEFVCNTLAQ IIAGDGDHIP
VSQMPVDGTF PVGTSKFEKR NLAQEVPVWE PSLCIQCGKC SMVCPHGVIR CKAYDPKYLA
NAPTTFKCSD AKGKNWTGLK YTIQVSVEDC TGCEICAHIC PARDKQNPER HALNMSPQEP
LRENEVDNWN YFVHIPEFDR SKINIKLIKE QQLQQPLFEF SGACAGCGET PYVKLMSQLF
GDRLVLGNAT GCSSIYGGNL PTTPYCTNAD GLGPTWSNSL FEDTAEFSLG FRISINKQKE
YAEELVKLLS TEIGETLATE LLEASQHSEP EIFEQRKRVK TLKEKLALID RQEAKNLLAI
ADMLVKKSVW AIGGDGWAYD IGYSGVDHVT ACGENVNMIV LDTEVYSNTG GQASKATPKA
AVAKFAAAGR PITKKDLGMI SMTYGNAYVA SIAMGARDEQ TLKALIEAEA YDGPSIVIAY
SHCIAHGISM ENGMEQQKLA VDSGHWLLYR YNPERLKEGK NPLILDSKKP KIPVEQFLNT
ENRFRMLKKS HPDMAKQYFE AIQKEVDARY ATYEYLAARK YPND