Gene Paes_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0527 
Symbol 
ID6460531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp570891 
End bp571373 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content52% 
IMG OID642724526 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002015230 
Protein GI194333370 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTAC TGACGAAACA TACCGATTAT GCCATCAGGG CATTGTTGAC ACTTGCGGGA 
CATGGTGAGG GGTACCTTTC GGCCCGGCGT ATCGCTGAAG AGCAGCAGAT TCCCTACCAG
TTTCTGAGGG GACTGTTGCA GGAGCTTGTG CGTGCAGGTT TTATCAGTTC CAGAGAGGGC
GCTCATGGCG GCGTGAAGCT TATCAAAGAT CCGGAAACCA TTTCTGTGCG TGAAGTGATT
GCGTTGTTTC AGGGCAGCAT AGAGCTTTCT GAGTGCATGT TTCGTAAACA GATGTGCGTC
AACCGCGCCA ACTGTGTGTT GCGCCACCAG ATCCTGAAGA TCGAGCGGAT GGTCAGTGCT
GAATTTGATA AGGTTACCAT TGGTTCACTG CTGCATGATC TGCAGGAGTC TGGCACGCAG
AGCGCTCATA AAGCAGTTAT GGCCGATGAA TCGAAGTGCG GAAGTGATAA AGGCGGACGT
TAA
 
Protein sequence
MQLLTKHTDY AIRALLTLAG HGEGYLSARR IAEEQQIPYQ FLRGLLQELV RAGFISSREG 
AHGGVKLIKD PETISVREVI ALFQGSIELS ECMFRKQMCV NRANCVLRHQ ILKIERMVSA
EFDKVTIGSL LHDLQESGTQ SAHKAVMADE SKCGSDKGGR