Gene Paes_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0519 
Symbol 
ID6460166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp562217 
End bp563239 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID642724518 
ProductHPr kinase/phosphorylase 
Protein accessionYP_002015222 
Protein GI194333362 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID[TIGR00679] Hpr(Ser) kinase/phosphatase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTGG ATCAGAAAGG TCTTAAGAAG CGATCGATGA CGGTCGCATA TTTTTTTGAA 
AATATCAGCA AAAGTCTGGA TATCAAGCTT CGCCGACTCA ACGAGGTTGA CGAGCAGAAA
CGGCGGATTT TCGAGCGCGA TCTCCACAGG CCGGGACTTG CTTTGGCGGG ATTTACAAAC
CTGTTTACCT ATAAACGGGT CCAGATTCTC GGCAATACAG AAACCCGTTT TCTGAATCAT
CTTGAAGATG ATGACAGAAA ACGTGCATTT GAGAGCCTCA TCAAGTTCAA GCTTCCCTGT
ATTATCCTGA CGAGCAACAA CAAGCTTGAA CCTGAACTGC TTGATATGGC TACCCGGGCG
GGAGTTCCCG TCTTTGTTAC CCGCCACTCA TCGACAAAGA CCATCTATCT GCTGACCGAT
TTTCTTGATG ATCAGTTTTC ACAGTATCAG CAGTTTCACG GTTCCATGGT CGATGTCTAT
GGCGTTGGTG TCATGCTTAT CGGCAACAGT GGCCTTGGAA AATCGGAAGT TGCACTTGAC
CTCGTCGAGC GCGGTCACCG TCTTGTGGCT GACGATGCTG TCGTCATTAA TCGTAAAGGG
GAAAATGTTC TGATCGCTTC CGGCAATGAG ATCGTTGATC ATTTCATGGA AATCCGGGGT
CTCGGCGTGG TGGATGTGAA AGCAATATTC GGTATCAGGG CAATCAGGGA CAAGAAAGTC
GTCCAGGTTG TCGTTGAGCT CCTTGAGTGG AATGAGGAAA GCGATTACGA ACGGCTCGGC
CTGGATACCA AGACAACCAA AATTCTCGGT GTCGATATTC CGCTCATTCA ACTGCCGATC
AATCCCGGAA AAAATATTAC CGTGATCATC GAGGTTGTAG CGCTCAACTA TCTGTTGAAG
CACTATTCCG GATATGTGGC TGCTGAAGCG CTTGAGCAGC GTATCAAAAG GGTTATCACC
AACGAGTCAT TGAAGAAGAG CGGTAAGGGA AGAACCTATT TAGCAAAGGA TTATGAGGAG
TAG
 
Protein sequence
MNLDQKGLKK RSMTVAYFFE NISKSLDIKL RRLNEVDEQK RRIFERDLHR PGLALAGFTN 
LFTYKRVQIL GNTETRFLNH LEDDDRKRAF ESLIKFKLPC IILTSNNKLE PELLDMATRA
GVPVFVTRHS STKTIYLLTD FLDDQFSQYQ QFHGSMVDVY GVGVMLIGNS GLGKSEVALD
LVERGHRLVA DDAVVINRKG ENVLIASGNE IVDHFMEIRG LGVVDVKAIF GIRAIRDKKV
VQVVVELLEW NEESDYERLG LDTKTTKILG VDIPLIQLPI NPGKNITVII EVVALNYLLK
HYSGYVAAEA LEQRIKRVIT NESLKKSGKG RTYLAKDYEE