| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0517 |
|---|
| Symbol | |
|---|
| ID | 6460375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prosthecochloris aestuarii DSM 271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011059 |
|---|
| Strand | + |
|---|
| Start bp | 560722 |
|---|
| End bp | 561729 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642724516 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002015220 |
|---|
| Protein GI | 194333360 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCATG TGGAGGAGTT TAAGCCAGCA GAAAACAACG AATCACAGTA CCCCTTTCTG
AAGGGATTTC TGGACTATGT GACGCTCGAA CGTCACTTTT CGCGTCACAC CCGAGAGGCC
TATCGTACCG ATATTTGTCA GTTTTACACG TTTATCCGTT ATCAGCATAC TCTTGCCGAC
AAGGATCCGA TCGATCCTGC GTCGATCAGT GTGCTCGACG TACGACTGTT TATGGGTGAG
CTGCTTGAAA AGGGTCTTCA GCCAAAATCA ATTGCACGCA AGCTTGCTGC AGTTAAAAGC
TTCTACAATT ATCTTCTTGA AACCGGTGCT GTCAAAGTTT CGGTTCCCTC ACAGGTGATC
ACTCCCCGTT TCAGTAAACC GGTTCCCGGA TTTCTCAGCG AGCGTGAGAC AGAGAAACTC
TTTGACGAAC TGCTTTCGCT GCCTGCTCCA GGTGAGGCTT TGGGAGCCGT TAGGGCAGGG
GATGGCGGCT TTACCTATGC GCGTGACAGG GCTCTTCTGG AAGTGCTCTA TGGTTGCGGT
CTGCGCATTT CGGAAGTCAT AGGTCTTCAA TATGAGAACG TCAATCTGCA GGACAGCCTG
CTTCGTGTTT CCGGTAAAGG GGGAAAACAG CGTATTGTAC CGCTTGGCGG CCCTGCGCGC
ACGGCATTGA GAAATTATTT TGAAGTCAGA CGAAACTTCT TTAGAATGAA AAATGAAGAG
TCGCCTGATG CGTCCTATGT GTTTGTAACG AAAAAAGGTA GGCGTATTTA TCCGGTTCTT
GTTCAGAGAG TTACCAGAAA ATATCTTTCA GCAGTGACAG AAATCAAGTA CAAGAACCCT
CATGTCCTTC GCCACAGTTT TGCCACACAT ATGCTCAACA GCGGAGCTGA CCTGAAAAGT
GTCAGTGAAA TGCTGGGGCA TACCAACCTT ACGACGACCG AAATTTATAC CCACGTAACG
TTTGGCAGAA TTAAAGAAGT TTACCTGAAA GCTCATCCGA AAGCCTGA
|
|---|
| Protein sequence | MQHVEEFKPA ENNESQYPFL KGFLDYVTLE RHFSRHTREA YRTDICQFYT FIRYQHTLAD
KDPIDPASIS VLDVRLFMGE LLEKGLQPKS IARKLAAVKS FYNYLLETGA VKVSVPSQVI
TPRFSKPVPG FLSERETEKL FDELLSLPAP GEALGAVRAG DGGFTYARDR ALLEVLYGCG
LRISEVIGLQ YENVNLQDSL LRVSGKGGKQ RIVPLGGPAR TALRNYFEVR RNFFRMKNEE
SPDASYVFVT KKGRRIYPVL VQRVTRKYLS AVTEIKYKNP HVLRHSFATH MLNSGADLKS
VSEMLGHTNL TTTEIYTHVT FGRIKEVYLK AHPKA
|
|---|
| |