Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0506 |
Symbol | |
ID | 6459452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | - |
Start bp | 547133 |
End bp | 549337 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724505 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002015209 |
Protein GI | 194333349 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATGT TTATACGAAA AGAAATTGAT CTGGGAAGCG GGAAAACACT CTCTATCGAG ACAGGGAAAA TGGCAAAACA GGCCGATGGC TCGGCCATTG TTCGCCTGAA TGACACTATG GTGCTGGCTA CCGTGGTTTC AAGCAAAACC CCTCCTTCCC CGAACCAGAG CTTTTTTCCT CTGCAGGTTG AGTACCGTGA GAAATATTCC GCTGCCGGAA AATTCCCCGG AGGCTTTTTC AAACGTGAAG GCAGGCCTTC TGAGAAAGAG ATTCTTTCAG CACGTCTTAT AGATCGCGCT CTTCGTCCGC TCTTCCCTGA CGGGTATTAT CAGGACACTC AGATTATCAT TTCGGTTATA TCCTCTGACC AGATCAACGA TGCCGATGTT CTTGGCGGGG TAGCTGCTTC AGCAGCGATC ATGGTCTCCG ACATCCCCTT TCAGAACTCG ATGTCCGAAG TTCGGGTAGG AAGAGTCAAT GGCGAATATA TCGTCAACCC CAACATCAAC GAACTGCGCG ACAGTGACAT TGATATCAGT ATCGGCGGAA CGGAGAATAC GATCTGCATG CTGGAAGGTG AGATGGACGA AATTTCAGAG GCTGAAATGC TGGAGGCGAT CCGTTTCGGT CATGAGGCCA TCAAAAAGAT CTGCGCTCTT CAGAATGAGA TCGCAGCCGA AGTCGGCAAA ACGGCGCGCA CCTTCAGCGC AGCCAAAGCT CCCGACAACC TCCGCCAGTC GATTGCTGAA ATCTGCAGCA ACGAGCTCAA AGAGCTCGCA TACATGCCGC TCTGCAAAGA AGAACGGGCT GAAAAAACAG CAGAGATTTA CAAAAACGCC AAGGCGCAGA CCTTGCAGCG CTATCAGCAG GAAATCACTC CCGAAGTCAT TGCCGCTGAA CCCGAAAAAG CGCTCTACCT GAACGAACAG ATCATCGGCG ACGCCATTCA CTCTATCGAA AAACAGGTTA TGCGCGAGAT GATCCTCGAC GACGCCAAGC GTCTTGACGG AAGGCGACTC GACGAGGTTC GGCCGATCAG CATCGAACTC GGCCTTATCC CCAGGGCACA CGGCTCGGCA CTCTTTACCC GCGGAGAGAC GCAGGCGCTT GTCACCCTGA CCCTGGGAAC AAAGAAAGAC GCCCAGATGA TCGATACGCT CACCGACGAC GCCGATAAAC GCTTTATGCT CCACTATAAC TTCCCTCCGT TCTCCGTCGG AGAAACAGGA AGAGTCGGCG GCACCAGCCG AAGGGAAATC GGCCATGGCA ACCTTGCTGA AAGGGCGATC AGGAAAGTGG CCCCAGCCGA ATCGGCATTC CCGTATACCA TCCGTATCGT TTCCGATATT CTTGAATCAA ACGGTTCATC CTCTATGGCT TCGGTCTGTG GCGGCGCTCT GGCAGCTATG GATGGCGGTG TACCGCTCAG AAAACCGGTC TCCGGCATCG CTATGGGTCT GATCAAGGAA GGCGACAGAT ATGCTGTCCT CTCCGACATT CTCGGCAATG AAGACCATCT TGGCGATATG GACTTCAAAG TAGCAGGTAC AGCCGATGGC ATTACCGCTT GCCAGATGGA TATCAAGATC GATGGTCTGG ATTACCACAT TCTTGAACAG GCGCTCGAAC AGGCGCTGCA TGGCAGATTG CACATTCTCG ACAAAATGAA CGAGGCAATC CAGGAGCCGA GAACCGAGAT CGGCAAATAC GCTCCAAAGC TCACCACCAT TCAGATTCCT GTCGATGCTA TCGGTATGGT CATCGGTAAA GGCGGAGAAA CGATCCGCAG CATCACCGAA GAGACCGGTG CTGAAATCAA CATCGAAGAC GACGGGACTG TTACCATCGC TTCGGCCAGT GGCGAAGGCG CTTCGGCTGC ACTTGAAACG ATCAAACTGC TCATTTCAAA ACCTGAAGTC GGCACTGTCT ACTCCGGTAA AGTCCGTGAT ATCAGGGAAG ATCTTGGTGC ATTTGTCGAG TTTCTGCCGA AGACAGATGG TCTGGTTCAT ATTTCCGAAA TTTCCAATGA AAGGGTCGCC AAAGTCAGCG ACCACCTGAA ACCCGGCGAC AAAGTCAAAG TCAAGCTTGT CGATGTCCGC AAGGATCCCC GCACCGGCAA AACCCGTTTT GCGCTTTCCA TCAAGGCGCT CGCGGAAAAA TCAGCCGATA ACGGAGCGAG CGACAAGGCG GAAGCCAACC GGTAA
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Protein sequence | MSMFIRKEID LGSGKTLSIE TGKMAKQADG SAIVRLNDTM VLATVVSSKT PPSPNQSFFP LQVEYREKYS AAGKFPGGFF KREGRPSEKE ILSARLIDRA LRPLFPDGYY QDTQIIISVI SSDQINDADV LGGVAASAAI MVSDIPFQNS MSEVRVGRVN GEYIVNPNIN ELRDSDIDIS IGGTENTICM LEGEMDEISE AEMLEAIRFG HEAIKKICAL QNEIAAEVGK TARTFSAAKA PDNLRQSIAE ICSNELKELA YMPLCKEERA EKTAEIYKNA KAQTLQRYQQ EITPEVIAAE PEKALYLNEQ IIGDAIHSIE KQVMREMILD DAKRLDGRRL DEVRPISIEL GLIPRAHGSA LFTRGETQAL VTLTLGTKKD AQMIDTLTDD ADKRFMLHYN FPPFSVGETG RVGGTSRREI GHGNLAERAI RKVAPAESAF PYTIRIVSDI LESNGSSSMA SVCGGALAAM DGGVPLRKPV SGIAMGLIKE GDRYAVLSDI LGNEDHLGDM DFKVAGTADG ITACQMDIKI DGLDYHILEQ ALEQALHGRL HILDKMNEAI QEPRTEIGKY APKLTTIQIP VDAIGMVIGK GGETIRSITE ETGAEINIED DGTVTIASAS GEGASAALET IKLLISKPEV GTVYSGKVRD IREDLGAFVE FLPKTDGLVH ISEISNERVA KVSDHLKPGD KVKVKLVDVR KDPRTGKTRF ALSIKALAEK SADNGASDKA EANR
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