Gene Paes_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0488 
Symbol 
ID6459296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp525839 
End bp526273 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content50% 
IMG OID642724487 
Producthypothetical protein 
Protein accessionYP_002015191 
Protein GI194333331 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.35949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAA CTCGACGACA GTTTGAAATT ATTCAGGAGC ACGCCATCAG GGAATTTCCC 
TATGAGTGCT GCGGCCTGCT TGCCGGTGTC AGAGAGAGGG GCCACCGGGG TGAGTACGAG
AATATTATTT ATGAGATAGC CCCATGCGTC AACGCTCTCT ATGTTGGCAG AGAGCATAGT
TTCGAGATAT CCTATTCAGA ATATATCGAT GTAGAGCGCG AGGCACGCAC TCTCGGGTAT
GAGATTGTCG GGTCATACCA CTCCCATATC AACTCTGCGG CAGTGCCTTC CAATAACGAT
ATTGATTTTG CGACCCCGGG CCAGTCAATG ATGATTATTG CTCTTCAGCA GAGAGTGCCT
TCGGCTGTCA CATCATGGCT TCTTCGTGAT TCGGGCGGAT TTCATCAGGA ACCGATCAGG
GTTATCGAGT CGTGA
 
Protein sequence
MRLTRRQFEI IQEHAIREFP YECCGLLAGV RERGHRGEYE NIIYEIAPCV NALYVGREHS 
FEISYSEYID VEREARTLGY EIVGSYHSHI NSAAVPSNND IDFATPGQSM MIIALQQRVP
SAVTSWLLRD SGGFHQEPIR VIES