Gene Paes_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0481 
Symbol 
ID6459512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp519990 
End bp520646 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content56% 
IMG OID642724480 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_002015184 
Protein GI194333324 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TAGGCGTTCT TCTCTCCGGC TGCGGAGTCA TGGACGGAAC GGAAATCCAT 
GAAGCCGTGC TGACACTTCT GGCTATTGAT GTCGCAGGTG CAGAAGCAGT CTGCATCGCC
CCCGATATCG AACAGCACCA CGTCATCAAC CATCTCACAG GAGAGGAAGT GAAGAACGAA
ACGCGCAACG TGCTCGCCGA GTCGGCCAGG ATCGCCAGAG GAAACATCAA GCCGCTTCAG
GAAATCGACT CGCTCGGGCT CGACGCACTG ATCCTGCCGG GAGGCTTCGG CGCAGCGAAA
AACCTCTCCG ACTACGCTTT TAAAGGTGAG CATTTCGATG TGCTGCCTGA AGTCGCAGAT
GCCATCCGTT CATTCTACAG GGCAGGCAAA CCGCTGGGAT TCATCTGCAT CTCACCAGTC
ATCGCAGCAA AAGTGCTTGC CGAAGAGGGC GTCGAGGTCA CGATCGGAAA CGACCATACT
GCTTCCGCCA ATATCGAAGC CATGGGAGCC AGACATGTCA ACGCGGAGGT CTTCAATATC
CACGCGAGTC TCGGCGGCAA GGTGATAAGC ACCCCTGCCT ACATGCTCGG CCCCTCGATC
AAGGACGTGG CCAAAGGTAT CGACAAGCTG GTCAACGCCG TGGTAAGGCT TGCATGA
 
Protein sequence
MKKIGVLLSG CGVMDGTEIH EAVLTLLAID VAGAEAVCIA PDIEQHHVIN HLTGEEVKNE 
TRNVLAESAR IARGNIKPLQ EIDSLGLDAL ILPGGFGAAK NLSDYAFKGE HFDVLPEVAD
AIRSFYRAGK PLGFICISPV IAAKVLAEEG VEVTIGNDHT ASANIEAMGA RHVNAEVFNI
HASLGGKVIS TPAYMLGPSI KDVAKGIDKL VNAVVRLA