Gene Paes_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0480 
Symbol 
ID6459511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp519071 
End bp519937 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content53% 
IMG OID642724479 
Productinner-membrane translocator 
Protein accessionYP_002015183 
Protein GI194333323 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG AACCGGTAGT ATTTCTGCTT CAGGTGCTTC GTATCTGGGT CCCTTACGGG 
TTGACCTCTG TCGGTGCGAC GTTTTCTGAA CGAGGTGGCG TTATCAACCT TGCGCTCGAA
GGGCTTATTC TCGCCGGAGC GTTCGGGGCG GCGGTCGGCC AGCATCTGAC AGGTTCGGCT
GCTCTTGGTA TTGTTGCCGG TATCCTCTGC GGGCTCTGTG TTGCGCTGCT GCATTCGTTT
ATTACGATAA CGCTTAAAGC CGATCAGATT GTCAGCGGAA TCGCGTTGAA TATTCTTGTC
ATGGGAGCGA CACGCTTTGG CTTGAAGATG CTGTTCGGCA GCTCCATGAA CTCGGATCGC
ATTGATGGAA CAGGGATATC GCTTGTGCTT TTTGATCCGC TTTTTCTCAT TGCTCTGGCT
TCAGTCATCA TCGGTCAGTT CGTCATGTTC CGAACCCCTT TCGGATTGCG CTTACGTTCA
GCGGGCGAGA GCGCCGAAAC CGTTGCTGCC GCAGGTGTCA GTGTGCCCGG GATACGCTAT
GCCGGCGTAC TTATCTCCGG TGTTCTGGCT TCTCTTGCAG GGGTTTTTCT CGCATATCAG
CAACATAGTT TTACCGATAA CATGTCGGCT GGCAGGGGAT ATATTGCGCT TGCCGCTATG
ATTATCGGCA AGTGGAATCC TGTCGGAGCG GCACTTGCCA GTCTTATGTT TGCTGCCGCA
GAAGCTCTCG AGATGTGGTT GCAGACAGGT TTTATTCCTT CTCAGCTGAT CCAGGCTCTC
CCGTATGTCG TAACGCTTCT GGTACTTGCT GGTTTTGTTG GCAAGGCCCG TGCCCCGAAA
GAGGTCGGGG TGCCTTACGA GAAGTAG
 
Protein sequence
MTIEPVVFLL QVLRIWVPYG LTSVGATFSE RGGVINLALE GLILAGAFGA AVGQHLTGSA 
ALGIVAGILC GLCVALLHSF ITITLKADQI VSGIALNILV MGATRFGLKM LFGSSMNSDR
IDGTGISLVL FDPLFLIALA SVIIGQFVMF RTPFGLRLRS AGESAETVAA AGVSVPGIRY
AGVLISGVLA SLAGVFLAYQ QHSFTDNMSA GRGYIALAAM IIGKWNPVGA ALASLMFAAA
EALEMWLQTG FIPSQLIQAL PYVVTLLVLA GFVGKARAPK EVGVPYEK