Gene Paes_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0478 
Symbol 
ID6459408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp513499 
End bp516129 
Gene Length2631 bp 
Protein Length876 aa 
Translation table11 
GC content50% 
IMG OID642724477 
Producthypothetical protein 
Protein accessionYP_002015181 
Protein GI194333321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAG ATGTCACTGA CTGCTGGTTG AAGGCAGTGC TTATCGCTTG TGTTGTACTT 
GCATTGCTTT GCTCTGTTCC CCTTTTTGCA GAAAATCAGT TGCCGGACGC TTCTTCAGCA
AGTCCGGAGT TTTCTCAGGA AGAAGAATTG ATGATCCTTG AAATTTTTTT CGATCGTCAA
TCGGCCGGTG TTCACCGCTG TTATCGCATA GCCGACGAGT TCTGGTTTCC ATTCGCATTG
TTTCAGCAGT ACGCACCTCT GCCGGAGTCC TGCTCTCACC ATTCAGGGGC GGTCTTTCGT
ACCACTCTCG GTACGATCGA GTTCGATCCT GCAATACTTC GCGTCATCGA GGGGCAGGCT
TTTATTTCCT ATGAGGGTCT CAAAAACAAC CTTCACATTC ATACGCTTTT CAACAAGTCG
ATCTATGCGG TCAAGTTTAT TGTTCCCTGG AGGATCCTGA CAAAGCGCCA ACCCCGCGCA
GTTCCTGCTG AGAGAACTCC TGATATTGCA GCACCGGATA ATGTTCTTTC TTTTCTGCAT
ATGGAAAGTC AGTGGTCGTA TGCAGTTCCA GCAAGCAGGT ATGGGTATCT TGAGTTAGAA
GCAGGGGGGG GAGTTGCTGG CGGTCTGTGG GATATGACCG GATCGGGTGA TCTGGCCGGC
AAGCCCGTTC TTTCTCAATT TCACTGGACG ACGATAAGCA AGCATGCTGC TTTGAGAATC
GGAACGGGCT CCAGTCAGCA TTACAGTCTG CTGGAAAGTA TGCCATACAG CGGCATTCAG
TTTGCCTGGA ACAATCGCGA CATTCTTCCC AACATTGATA ACGATCGGAA TACCCAGTCA
GACGTTTTCC TGAATCTTGA CCGAAACCAG CGTCGTTCCA TCGAGGGTCT GGGGCCATCT
GGTGGAATAG CCGAACTGCG TTTTGACGAT TACATCGTTG CGCGTCAGAG AATTCCGTTC
AACAGAAAAT TTGTGTTCAG AAACGTTCGT ATGAACGCAG ATCCACGGGT CATAGAGGTC
TATCTCTATG ATCATTCCAT CTACGAGAAG CCGTCGCGCA TTGTCGACTA TACCAGGTCT
GTTTCCAGCA GGAGTCTTGC CGACGGAGAA ATGCTTGTCC ATGGATCTGC CGGGTTTTCC
GGAAACATTC TTGCCGATGA TAACCGCCAT GAGGGATGGA CGGGATCAGG TGCTTTTCTG
TATGGGCTCA GTGACCGCCT GACCCTTGAG GCTTCATTGC AGAAGCACCC GGAATCCGAT
AGCATTGATG GACTTATTGG TACGATTCTG TCGATAGGTC CAGAGTGGAA TAGCTCGCTG
TACGGGGCAT GGTCACATGG CGGGCCAGCT ATCGACTTCT CACTTTTCGG CTATGGCAAT
GCGTGGCGTT TTACACAACG CACGCAATGG AACGGCCGGA AGATCGGATA TGCATCCGGT
TCAGGGCGGC AGAAGCATGC CATGCGTCTG CAGGTCAGGC CGTTTTCATG TTTGAACACG
CTGCTCTACG GGTATTACAG TAAAGAAGGC GGAGCAGATG ATGTGGCCTC TCTCCTGCCC
GGCGGGACGG TTTTGTTGTC TTCATGGTTA AGCGTATCGG CTGCGCCAGA CGATGAGAAG
GGCGACTACC GTTATGAAGC CAATATAAGA GTCTTACAGG ATATGGATGT GCGATTGAGG
TACGATCAGA ATGTGTTGAC AACCGATCTG GGCTATGATA TCGACAACAA TCATTCTGTT
CAGTTTCTTC ATTTTGTGAC GCCTCAAACC GGTCAGCAGG CGCTTAATGC ATCATGGTAC
TGGCATCCGG GGGGGGATTA CGGCAGTCGC GTGCGCCTGG GTTTATCGCA GAGCTCCAGA
GGAGTTGGCG TAAGCGGTTC GTGGAGTAAA GACTTCAATG TCGGCCTCAA TGCAGTTCTT
GCCTTCAATA ACAACATGAA CCAGGCAGGA AGCCTCTTCA TCGATGAGGA TAACCTTCCT
GGCGATGATT ACACCAAATG TGCTGTCAGC TTTGCTCTCA AGTGGGATCT CGGGCGCTCA
TCCAGGCGTT TTTATCCTAT TGAGCGTTCT GCAATTAATT ATACAAGAGG GGGACTTACA
GGATCGTTGA AGATTAAAAA AGTTGACGGT TTAGAGGGCT ACTCTGTCGA TGATGCAGCC
ATTCTGATCA ACGGCAGAAA ACTTGGGCAG CGCCAGACAG GGGGAACCTT TTTTATCGGT
AATCTCAAAC CCGGGCTCTA TACCGTCTCC GTTGATCCTG AACATCTTCC GGTTGAACTT
GTTGCGGATC GTCAACACCA AGTTGTTGAG GTCAAAAGCG GTGATATTAC CGAGGTGGAG
CTTCTTCTCA AGGAAGAATA CGGAGTTGCC GGGAAAGTTT GCACTCAGTC GGGCACTCCA
CTGCTCCAGC TCCCTGTCAG CATTGTCGAT ACCCAAGGCG CTGTTGTCAC AACATCTGCA
ACCGATGAGT TCGGTTACTA TCGGGTCGAT GGTCTGGAAG CGGGAGCCTA TGTTGTCAGG
GTTTCACTAC CCTTGGGAGA GAGTGGTGTT ACTCTTTTTG AAAGAGCATG CAACATCAGC
GACGATTTTC TGTTCGGCAT CGATATTGTA GTTCCTGAGC AATGCCAGTA G
 
Protein sequence
MPSDVTDCWL KAVLIACVVL ALLCSVPLFA ENQLPDASSA SPEFSQEEEL MILEIFFDRQ 
SAGVHRCYRI ADEFWFPFAL FQQYAPLPES CSHHSGAVFR TTLGTIEFDP AILRVIEGQA
FISYEGLKNN LHIHTLFNKS IYAVKFIVPW RILTKRQPRA VPAERTPDIA APDNVLSFLH
MESQWSYAVP ASRYGYLELE AGGGVAGGLW DMTGSGDLAG KPVLSQFHWT TISKHAALRI
GTGSSQHYSL LESMPYSGIQ FAWNNRDILP NIDNDRNTQS DVFLNLDRNQ RRSIEGLGPS
GGIAELRFDD YIVARQRIPF NRKFVFRNVR MNADPRVIEV YLYDHSIYEK PSRIVDYTRS
VSSRSLADGE MLVHGSAGFS GNILADDNRH EGWTGSGAFL YGLSDRLTLE ASLQKHPESD
SIDGLIGTIL SIGPEWNSSL YGAWSHGGPA IDFSLFGYGN AWRFTQRTQW NGRKIGYASG
SGRQKHAMRL QVRPFSCLNT LLYGYYSKEG GADDVASLLP GGTVLLSSWL SVSAAPDDEK
GDYRYEANIR VLQDMDVRLR YDQNVLTTDL GYDIDNNHSV QFLHFVTPQT GQQALNASWY
WHPGGDYGSR VRLGLSQSSR GVGVSGSWSK DFNVGLNAVL AFNNNMNQAG SLFIDEDNLP
GDDYTKCAVS FALKWDLGRS SRRFYPIERS AINYTRGGLT GSLKIKKVDG LEGYSVDDAA
ILINGRKLGQ RQTGGTFFIG NLKPGLYTVS VDPEHLPVEL VADRQHQVVE VKSGDITEVE
LLLKEEYGVA GKVCTQSGTP LLQLPVSIVD TQGAVVTTSA TDEFGYYRVD GLEAGAYVVR
VSLPLGESGV TLFERACNIS DDFLFGIDIV VPEQCQ