Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0438 |
Symbol | hisH |
ID | 6459221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 471657 |
End bp | 472262 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642724438 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_002015142 |
Protein GI | 194333282 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00049753 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTTTA TTGCTGATTA TGGCGCAGGC AACCTGCATT CTGTGCAAAA AGCATTTGAG TACCTTGGGG TTAAAACCGT TGTCAGCGCC GATGCTTCAA GGCTTTCAGA GTATTCGAAA GTTCTTGTGC CGGGAGTCGG TGCTTTCGGT CACGCCATAG GATCGTTCAA CCGCTCCGGT TTCAGCGATG CTATCAGGGA GCACATCGAC AAGGGACGTC ATGTGCTTGG GATCTGTCTC GGTATGCAGC TCTTTCTTAC TGAAAGCGAA GAGATGGGTG CCCACAGGGG TCTCGATGTT GTCGCAGGAA AGGTGAGGTT GTTTCGCGAT ACCGATGAGA AAGTGCCGCA GATTGGCTGG AACTCTGTCG ATTACTGCCG CGATAGCGAG CTTTTTCGGG GTATACCCGA TAAGTCGTTT TTTTATTTTG TGCATTCCTA TTACTGCGAT CCCGTGCATA GCGCCGATGT TGTGGCAACG ACCTTTTTCG GCGGAAAAAA CTTCTGTTCG GCCATTGAAA AAAATGGTAT TTTCGCTGTA CAGTTTCATC CGGAAAAGAG TTCGGAAGCG GGACTGCAGG TATTGAAAAA TTTTGCGAAG TGCTAA
|
Protein sequence | MVFIADYGAG NLHSVQKAFE YLGVKTVVSA DASRLSEYSK VLVPGVGAFG HAIGSFNRSG FSDAIREHID KGRHVLGICL GMQLFLTESE EMGAHRGLDV VAGKVRLFRD TDEKVPQIGW NSVDYCRDSE LFRGIPDKSF FYFVHSYYCD PVHSADVVAT TFFGGKNFCS AIEKNGIFAV QFHPEKSSEA GLQVLKNFAK C
|
| |