Gene Paes_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0433 
Symbol 
ID6459560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp466754 
End bp467638 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content48% 
IMG OID642724433 
Productprotein of unknown function DUF88 
Protein accessionYP_002015137 
Protein GI194333277 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATA AAGGAAATAG AAAAGCAGGA GTTTTCATCG ATGGAGCAAA TCTTTTCTTT 
ACCCAGCGCC ACATGGGATG GCAGATTGAT TTTTCTCGTC TGATCGCTTT TTTCATGCAG
TGTTTCGATT CTGTCGAAGC TCGTTACTAT GTTCCTGAAT CGGGAGCTCT TTCACAGGAA
CAGGTGGCAT TTAACAGGAT GCTTGAGGCT AATGGGTATA CCATTACGTC AAAGCCGGTC
AAAAAGATTG TCAATAAAGA GACCGGCGAG GTCGTCATGA AAGGCAATCT TGATGTTGAG
CTGGTTGTCG ATGCACTGAC GACAGCTTCG AGATATGATT CCTTCATCCT CGTTTCAGGA
GATAGTGATT TTCTGCCTTT GATACGAGCG CTGCGTTCCA GAGGCAAGGA TATTCAGGTC
TATTCGACCC GGGGGCTGAG CGCCTGGGAG CTGGTTGCTG AACCGGGTAT CGGGTGTCAT
GATTTTTCCG ATATCCGTTC CAAAATCGAA CTGATCGCTC CTCACGAGGT GCAGCAATCA
GCGCATGCAG AATCGCCTGA AAGCGTTTCA GGTCAAGCAG GCTTGCCGAC AAAAGGCGAG
ATATTTACCG GATCGATTAT TTCCGTGAAG TCTTACGGTA TTTTTCTCAG TAATCCCTAT
CATGTCAAAT GTCTTCTACC GTTGAGTTTT CTGGGTGTTG AAACCAGAAT TTCCAGTCTG
CCATCGATAG TTCGCTCTAC CGACCTGTTT CGGGTTGCGG TTTTTGATGT GGATGCAGAG
GGTGGTCCTC CCCGCATTAC CGTCAAACTC ATCGATCGTC AGATGTCGGG TGTGCTCGAA
GAGCGGGCGT TTCGTTTCCT GCAGAAAAAC AGTGCAAAGA ACTGA
 
Protein sequence
MPDKGNRKAG VFIDGANLFF TQRHMGWQID FSRLIAFFMQ CFDSVEARYY VPESGALSQE 
QVAFNRMLEA NGYTITSKPV KKIVNKETGE VVMKGNLDVE LVVDALTTAS RYDSFILVSG
DSDFLPLIRA LRSRGKDIQV YSTRGLSAWE LVAEPGIGCH DFSDIRSKIE LIAPHEVQQS
AHAESPESVS GQAGLPTKGE IFTGSIISVK SYGIFLSNPY HVKCLLPLSF LGVETRISSL
PSIVRSTDLF RVAVFDVDAE GGPPRITVKL IDRQMSGVLE ERAFRFLQKN SAKN