Gene Paes_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0425 
Symbol 
ID6459545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp457964 
End bp458668 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID642724425 
ProductABC transporter related 
Protein accessionYP_002015129 
Protein GI194333269 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TTCTTCTGAA GCTGGTATCG GTCCGCAGGG AGCTTGAGCT TTCCCGCGAT 
ATTCTCCAGA CCATTATTCC CGGTCTCTCG CTTGAGATTC GCGAGGGGGA GTTTCTTTCC
ATCACAGGCC CTTCGGGTTC AGGTAAATCG ACTTTGCTCT ACATCATGGG AGGCCTCGAT
AAACCGACAT TCGGAGAGGT CTGGCTCGAC GGTGACAATA TTACGGAAAA AAGCGAGAAG
GAGATGACCG TCATTCGCAA TGAAAAGATT GGCTTTATCT ATCAGTTTCA TTTTCTGCTT
CCGGAGTTCA CTGCGTTGGA AAATGTCAGT ATGCCGATGA TGATTAACGG CAAAAGGACC
AAAAAAGAGA TTCGCGAGCG CGCTGCTATG CTGCTCGATA TAGTCGGCCT TGTCGATCGC
GCCGATTACA GGCCCAGTCA GTTGTCCGGC GGACAGCAGC AGCGTGTTGC TATCGCCCGG
GCGCTCTCCA ATGAGCCCAA AATTATTCTC GGCGATGAGC CGACTGGAAA TCTTGATTCT
AAATCGGGAA AAATGGTCTA TGCGTTATTT GAACGGTTGA ACCGGGAACT CAACCAGACC
GTCATTTTTG TTACCCATGA TGAGGAGTTT GCCAGACGAG CCAAGCGCAG GATTCATCTC
GTTGACGGGA AAATCGAGAG TGATACCGTC ATTCAGCAAG GGTAG
 
Protein sequence
MNDILLKLVS VRRELELSRD ILQTIIPGLS LEIREGEFLS ITGPSGSGKS TLLYIMGGLD 
KPTFGEVWLD GDNITEKSEK EMTVIRNEKI GFIYQFHFLL PEFTALENVS MPMMINGKRT
KKEIRERAAM LLDIVGLVDR ADYRPSQLSG GQQQRVAIAR ALSNEPKIIL GDEPTGNLDS
KSGKMVYALF ERLNRELNQT VIFVTHDEEF ARRAKRRIHL VDGKIESDTV IQQG