| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0409 |
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| Symbol | |
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| ID | 6458547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 445153 |
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| End bp | 445770 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642724409 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002015113 |
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| Protein GI | 194333253 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.220801 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGCATG ATGTCTGTCA AACCTCTCTA CCTGTACATA GCAACACCGT GACATTGCAG
AAAACCGGTC AGTCCAACTC AGAAGAGTCG TTCAGTGCCC TCGTAGCAGA GCACCAGAAT
ATGGTTATCA ACACCTGTTA CCGGTTTGTA CTCAACAGGG AGGATGCTGA AGATATTGCC
CAGGAAGTAT TTATCGAAGC GTATCGCTCT CTCGAAAGAT TCAGAAATGA ATCGAAACTC
TCGACATGGC TCTACCGTAT CGCTGTAACA AAATCACTTG ATCACCTCCG CAAAAAGAAG
CGCAAAAAAC GGTTTTCGTC GTTGAAACGC ATGATCGGTC AAGAAGATCC CATACAGGAA
ATAGCTCTTC CCGACAACGA TACCCCATCG GATCTCTGCC TCGAACAAGA ACGGGTAAAG
GTGCTTCAGA ATGCCCTTGA CAGCCTCCCG GACAATCAGA AAACGGCATT TCTTCTCAGC
AAAAGCGATG GATATAGCAA TCAGGAAATA GCTGATATCA TGCAGACCTC AGTATCGGCA
ATCGAATCTC TTATACACAG GGCTAAAAAA AACCTTCAGA AAAAGCTTGA AAAACACTAC
TCCGCAGAAA AGGCATAA
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| Protein sequence | MMHDVCQTSL PVHSNTVTLQ KTGQSNSEES FSALVAEHQN MVINTCYRFV LNREDAEDIA
QEVFIEAYRS LERFRNESKL STWLYRIAVT KSLDHLRKKK RKKRFSSLKR MIGQEDPIQE
IALPDNDTPS DLCLEQERVK VLQNALDSLP DNQKTAFLLS KSDGYSNQEI ADIMQTSVSA
IESLIHRAKK NLQKKLEKHY SAEKA
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