Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0402 |
Symbol | gatA |
ID | 6458665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 437769 |
End bp | 439202 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642724402 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_002015106 |
Protein GI | 194333246 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0325637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000425632 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAATTTT CCTCATACCG TGATCTGAGA GAGAAACTGC TGGCACGGGA GATGAGCTGC GAGGCTGTTG TGACGGCCTA CCTGCAGCGC ATCGAAGCGA CCCGTGACAG AAACATTTAC ATTTCTGTTT TTTATGATGA AGCCCTTCGG CAAGCCAGAT CGCTTGACCG TAAGCTTGAT GCCGGCGAAA CGCCGGGTAA GCTTTTCGGT ATGCCTATGG CGATCAAGGA TAACATCTCT ATCGAAGGCA CCGGTCTGAC TTGTGCGTCG AAGATCCTTT CCAATTATAC TGCCGTGTAT GACGCAACTG TTATCCGACG CCTGAAGGAG GAGGATGCGG TGTTTCTCGG CAAGGTCAAT ATGGATGAGT TCGCCATGGG AAGTTCGAAT GAAAACTCAT CATTCGGACC CGTTCCCAAT CCGTATGACA GCACGAAGGT TCCCGGAGGT AGTTCAGGGG GATCGGCTGC AGCAGTGGCC GGCGATCTGG CCCTTGTAGC CCTCGGGTCG GATACCGGCG GATCTGTCCG CCAGCCAGCC GGGTTCTGTA ATGTTGTGGG GCTGAAGCCG ACCTATGGAA GAATTTCCCG CTATGGCGTG GTCGCGTTCG GTTCTTCTTT TGATCAGATC GGTATTCTGT CAAAGAATGC CGACGATGCG GCCGCTGTTC TTGGCGTTAT TGCGGGTAAT GACGGGAGCG ACGCGACCTC ATCCCATAAT CAGGTGCCTG ATTATGCCGC TGAAATGGAA GGTGTTTCGC TCAGAGGGCT TAAAATCGGT ATTCCGAAAG AGTATTTTCC CGAGAGTCTC AACAGTGATG TCGCTTCGGT TATTCAGGAG CGTCTGGATC TGCTCCGTTC GCTCGGTGCT GAAATGATTC CTATTACGCT GCCAGAGAGC GACTATGCTA TTGCGGCATA TTACATTCTG ACAACCGCTG AGGCTTCATC CAATCTTGCA CGGTTCGACG GTGCCCGGTA CGGGTATCGC TCTGAGAAGT CTTCGGACCT GACCGACATG TACGTGAACT CCAGGACTGA GGGGTTTGGT GAGGAGGTCA AACGCCGGAT CATGCTGGGT ACCTATGTGC TTTCGGCAGG CTATTATGAT ACCTATTACA AAAAAGCACA GCAGGTCAGA AGGGTGTTTC TCAACCGATA TCGCGAAGCG CTGGCCAACG TCGATGTCAT TGCTGGTCCT ACGTCGCCTT TTCCTCCTTT TGGCATAGGC GATAAGATGG ATGATCCTCT TGAAATGTAT CTTGCCGATG TGTTTACCGT TCCTGCAAGT ATCGCGGGCA TTCCTGCACT GAGCGTTCCT GTCGGTTTCG ACAGTTCCGG CCTTCCAGTC GGGATGCAGC TGATCGGTAA TTTCTTTGAA GAGGGGAAAC TGCTCGGTAC GGCAAGGGCC GTTCAGAATG CCGGAAAGGT ATAA
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Protein sequence | MQFSSYRDLR EKLLAREMSC EAVVTAYLQR IEATRDRNIY ISVFYDEALR QARSLDRKLD AGETPGKLFG MPMAIKDNIS IEGTGLTCAS KILSNYTAVY DATVIRRLKE EDAVFLGKVN MDEFAMGSSN ENSSFGPVPN PYDSTKVPGG SSGGSAAAVA GDLALVALGS DTGGSVRQPA GFCNVVGLKP TYGRISRYGV VAFGSSFDQI GILSKNADDA AAVLGVIAGN DGSDATSSHN QVPDYAAEME GVSLRGLKIG IPKEYFPESL NSDVASVIQE RLDLLRSLGA EMIPITLPES DYAIAAYYIL TTAEASSNLA RFDGARYGYR SEKSSDLTDM YVNSRTEGFG EEVKRRIMLG TYVLSAGYYD TYYKKAQQVR RVFLNRYREA LANVDVIAGP TSPFPPFGIG DKMDDPLEMY LADVFTVPAS IAGIPALSVP VGFDSSGLPV GMQLIGNFFE EGKLLGTARA VQNAGKV
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