| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0393 |
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| Symbol | |
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| ID | 6459209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | + |
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| Start bp | 427005 |
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| End bp | 428327 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642724393 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_002015097 |
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| Protein GI | 194333237 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00625189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00446246 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACATCAT TGCTTCCCTT TTTCATGTTT GGATCAGTTT TTCTGCTCCT GCTTCTGGGA
TATCCTGTTG CATTGACGCT AGGGGGTGTT TCAGTCATCT TCGGCCTTTT GATCTTTGGG
CCGGAGTTTT TTGCCCTGCT GCCGCTTCGC ATCTGGGGAA CAATGAATAA TGTTGTTCTT
CTGGCGGTCC CGCTGTTTGT GTTTATGGGC GTGATGCTTG AAAAGTCCGG TATCGCAGAA
AAACTACTCG AGACCATGAG TATGCTCTTT GGCAAATTCA GGGGAGGCCT TGCTCTTTCA
GTTGTTATTG TCGGTGCCCT GCTTGCTGCA TCGACAGGGA TTGTCGGCGC CACTGTTGTG
ACTATGGGCC TGATGAGTCT GCCGGTAATG CTCAAACGGG GTTATCAGCC TGAACTGGCG
ACAGGGACCA TTGCCGCATC TGGTACACTT GGCCAGATTA TTCCTCCAAG CATCGTTCTC
GTTCTGCTCG GGAGCATTCT CAATGTCTCA GTCGGCGATA TGTTTGTAGG GGCGTTGATT
CCCGGACTTA TGCTGGTGAC AGCCTATCTT CTCTATATTG TGTTGCTCGG TTTCATGAGG
CCCGATACTA TGCCATCTGT ATCGCAGGAG GAGATGCTTT CGTTTGCTTC GAAGGCTTCA
ATGAAAACCG TTATTGAAGC ATTTCTCATT CCCATGCTGC TTGTCCTGGC TGTACTCGGT
TCTATTTTTG CCGGCATTGC CTCTCCGACA GAGGCGGCTG CAATCGGAGC CTTCGGCGCG
CTGCTTCTCA CGCTCTTCCA GAGAAAATTG TCTCTCGACG TTCTCCGCTC TGTCATGCGC
GAGACGACTT CGCTGACATC TATGGTCTTT ATGATTCTTG CCGGTGCCAG CGCCTTCAGT
CTTGTTTTCA GGGGAATGCA TGGTGATCGT CTCCTTGCCG ATGCGATCCT TCAGGCTAAC
CTCCAGCCCG AACTGTTTCT TGCTCTGGTG ATGGTTGTTG TCTTTCTTGC CGGGTTTTTT
ATCGATTTTA TCGAGATCAT CTTTATCATT GTTCCTGTTG TCGCTCCGGT TTTCACCGCA
TTCGGGGTAG ATCTGCTCTG GATCGGCGTG CTTCTTGCGA TGAACCTTCA GGCATCCTTT
CTTACCCCTC CGTTCGGTTT TTCACTGTTT TATCTTAAGG GCGTTGCCCC GAAAGAGGTG
ACGACAAGCC ATCTTTATCG AGGCATCATT CCATTTATTG TCATTCAGGT TATGATGCTG
GTTCTTGTCA TCGTCTTCCC CGAACTGGTA ACCTGGCTGC CGAAAGCTCT TTCAGGACAC
TGA
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| Protein sequence | MTSLLPFFMF GSVFLLLLLG YPVALTLGGV SVIFGLLIFG PEFFALLPLR IWGTMNNVVL
LAVPLFVFMG VMLEKSGIAE KLLETMSMLF GKFRGGLALS VVIVGALLAA STGIVGATVV
TMGLMSLPVM LKRGYQPELA TGTIAASGTL GQIIPPSIVL VLLGSILNVS VGDMFVGALI
PGLMLVTAYL LYIVLLGFMR PDTMPSVSQE EMLSFASKAS MKTVIEAFLI PMLLVLAVLG
SIFAGIASPT EAAAIGAFGA LLLTLFQRKL SLDVLRSVMR ETTSLTSMVF MILAGASAFS
LVFRGMHGDR LLADAILQAN LQPELFLALV MVVVFLAGFF IDFIEIIFII VPVVAPVFTA
FGVDLLWIGV LLAMNLQASF LTPPFGFSLF YLKGVAPKEV TTSHLYRGII PFIVIQVMML
VLVIVFPELV TWLPKALSGH
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