Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0392 |
Symbol | |
ID | 6460610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 426436 |
End bp | 427008 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642724392 |
Product | Tripartite ATP-independent periplasmic transporter DctQ component |
Protein accession | YP_002015096 |
Protein GI | 194333236 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000784844 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00380366 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCGCA GCAGATTTCT TTCCTCTATC ATTGTCAACA GCTATCCTAT GCGTTTAATC AGAGCCTCTA TTCGGGCGAT TGATCTTTTC ACGTTATGGA CCGGGCGTGT TGTGAGCTGG CTGGCCCTCC TTCTTGTTCT GGTTGTCGTT TACGATGTTT TTACCCGCTA TGTGCTCTCA TCGAGCAGTG TCGGCGTTCA GGAGCTGGAG TGGCATCTGT TCGCGCTGAT TTTTCTGTTA TCGGCAGGCT GGACGTTGCA GCAGGACAAG CATGTCCGCG TTGATGTGTT CTATTGTCGT CTTTCTGTTC GGCATAAGGC TCTGATCAAT CTCGCAGGAG GTCTGCTGTT TCTTATCCCG TTTTCTGTGA CAGTTATTAT TTCCTCATGG CCTTTTGTCT CTAATTCCTT TGCGGTAATG GAGTCGTCAC CCGACCCGGG TGGGCTTCCC TGGCGTTTTC TGATCAAGGC GGCTATTCCA ACCGGTTTTT TCCTGTTGCT TCTGCAGGGG ATTTCCGGTA TCCTCCGTTC GGTTCTCACT CTTTCTGGTC AACCTCAGCA TTCAGGGATA TGA
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Protein sequence | MSRSRFLSSI IVNSYPMRLI RASIRAIDLF TLWTGRVVSW LALLLVLVVV YDVFTRYVLS SSSVGVQELE WHLFALIFLL SAGWTLQQDK HVRVDVFYCR LSVRHKALIN LAGGLLFLIP FSVTVIISSW PFVSNSFAVM ESSPDPGGLP WRFLIKAAIP TGFFLLLLQG ISGILRSVLT LSGQPQHSGI
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