| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0384 |
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| Symbol | |
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| ID | 6459267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 415837 |
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| End bp | 416910 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642724382 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_002015088 |
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| Protein GI | 194333228 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.333421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0675969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGA CAGAACATCT AACCGCCGAA CGCAAACATC ATCATGTCGA AATCTGTCTG
CATGACGATG TCCGATTCAG CGGCAAAACA ACCGGCTTTG AACACATCGA GCTGGAACAT
AACGCCGTTC CGGAGATCAA CTTCTCGGAG ATTGATCTGG CAACGACGTT TTTAGGCCAC
AGGATCAACT ATCCCTTCAT GATCTCCTCC ATGACCGGAG GCTACACCAA AGCCGCCGAC
CTCAACAGGA GCATAGCCGA AACATCAGAG AAGCTGAAAA TACCGCTCGG CGTGGGAAGC
ATGAGACAGG CTCTGGAAAA CGACAATTTC AGACAAAGCT TCAGTATCGT TCGCCAGGCT
GCCCCGTCAA TACCGGTGCT GGCAAATATC GGCGCGCCTG AGATCGCCGG AGGAGTCTCC
AAACAGGATA TTCTATCCCT CATCGACATG GTCGCTGCCG ATGCCCTGAT CGTTCACCTC
AATCCTGCAC AGGAGCTTTT TCAACCGGAA GGAAACACCG ACTTCAGTCA TTTCCTCAAC
AATCTCGAGG AAATAGGTTC GGCACTCCCG ATACCGATTA TTGCAAAAGA GGTCGGTTGC
GGCATTTCAG CTGAAACAGC AAAAAAACTG ATCGATGCAG GTGCTGCCGT AATCGATGTG
GCCGGCGCAG GCGGACTCAG CTGGCAGAAA GTAGAAGAGG TCCGTTATCT GCGACAGTTC
GGAGAGGACC GGCGTTTCAG TCCTTCAGCC CTTGATACGC TGCTCAACTG GGGCATCCCA
ACCTCACGCT GCCTTGCCGA TATCGCAGCA ATGAAGCGGC GGGAACCTCG CTATGAACCG
ATCGAAATCA TAGCTTCCGG AGGCATTGCC AACGGTATCG ATATAGCCAA AGCTATCGCT
CTCGGTGCAG ATATTGCCGC ATCAGCAGGA ATGATGCTCA AAGCCCTGCA CCATAATATT
CTTGAACAAA CGATCCTTAC CTGGATGAAT GATCTGAAAG CGGCTATGTT TCTTACCGGA
TCACGAACCA TAAGGGATTT ACAACAAACC AGGACCATTA TACACCATGG CTAG
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| Protein sequence | MNQTEHLTAE RKHHHVEICL HDDVRFSGKT TGFEHIELEH NAVPEINFSE IDLATTFLGH
RINYPFMISS MTGGYTKAAD LNRSIAETSE KLKIPLGVGS MRQALENDNF RQSFSIVRQA
APSIPVLANI GAPEIAGGVS KQDILSLIDM VAADALIVHL NPAQELFQPE GNTDFSHFLN
NLEEIGSALP IPIIAKEVGC GISAETAKKL IDAGAAVIDV AGAGGLSWQK VEEVRYLRQF
GEDRRFSPSA LDTLLNWGIP TSRCLADIAA MKRREPRYEP IEIIASGGIA NGIDIAKAIA
LGADIAASAG MMLKALHHNI LEQTILTWMN DLKAAMFLTG SRTIRDLQQT RTIIHHG
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