Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Paes_0367 |
Symbol | |
ID | 6460555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prosthecochloris aestuarii DSM 271 |
Kingdom | Bacteria |
Replicon accession | NC_011059 |
Strand | + |
Start bp | 401665 |
End bp | 404475 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642724365 |
Product | translation initiation factor IF-2 |
Protein accession | YP_002015071 |
Protein GI | 194333211 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000368497 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.59996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTG AGGAAAAGGA AATGAAATAT CGAATAAGCG ATATTGCCAG AGAACTGCAG GTCAGTCCTC AGGAGGTATT GCATTTTGTT AAGCAGGAGG GCGCAAAAGT TGCATCAACA TCCTCGATGG TGAAATCTGA CATGCGCGAG CTGATTCTCG GTCATTTCAG CGATGAAAAA AGGCTTGTCG ACCAAACCCG CAAAATTCGC GAGGAAAAAC GTCAGCGTCT GACGCGTCTT GAAGAGCAGT CCCGCAAAAC CTATGAAAAG GAACAGCAGC TCAAAGACTC TATCGCTGTT TTTCCTGAGC CTGGTCCGGT GTTGAAAAAA GATCATGTTC ATGAGGAACC CGAAAAGCCT GCCATAGTTA TTTCGGAATC CGAACCGGAA GTCGAGCCGG AAGTCGAACC CGAACAGCCG GCGGCAGCGC AAGAAGCAGA GGAGGCTGTC CCCACTGAGG CTGTTTCTGT ACCTGAACCC GTTGAGCAAG AGCGCGTTGT GCCGGCCCCT GAAAAGCCTG AAGCAGAAAA GCCGGTCCCT GAGCAGTCAT CGACTATGAA AGCACAGGCC TCTCCTGAAA TGCAGGTTAC CTATGAAAAG CCGAAGAATA TCGGTGGTCT GACCGTTCTG GGTTCAATTG ATGTCAGGAG TGCTCTCGAT CGGGGCAGTG AGTCTGACAG AAAGAAGAAA AACCGCAAAA AGCGTTTCAA GGAGCAGGCG GACGAGCTTA AGGGTGAGTT CGAGAATGCA GGAAAGGCGG AAGGCGATAA AAAACCGGCA AAGAGCGGCG AAGCTAAAAC CAAAGCCCCG AAGAAGGCGG CAGGAACAAC AGGAAGTGCT GCCGAAGATA CCACTTCGTC AAAGAAGAAG AAGGGCGGCA AAAAGAAGAA GCCGGCCGTT GACGAGAAAG TTATCTCCCA GAATATCCGA AGTACTATTT CAGGCATGGA CGACAGCAGC GGTGGCTCGG GTTCTCGCCA GAAGTTCCGT AAGATGCGCA AGATAGAGCG TGAAAAGGAG CTTGAGGCAG CCGAGGCGGT CAAGGAAGCA GAACGTAGTA TTGTACGGGT TACGGAGTTC GCGACAGCAC ATGAACTTGC GGACTTGATG GGTATAACCG CCAAGGAGAT TATCCAGCGC TGCTTTACTC TGGGCAAGTT CGTTACTATC AACCAGCGTC TTGATAAAGA AACGATCGAG CTTGTTGCGC TGGAGTTCGG TTTTGAGGCC GAGTTCGTGT CTGAAGTTGA GGCGACTGAA GTGTTTGAAG TCCACGATGA TTCTGAAGAT CTTGAGATCA GACCTCCGGT CGTCACGATC ATGGGGCATG TCGATCACGG CAAAACATCG TTGCTGGACT ATATCCGAAG CAGTAATGTC GTTGCCGGTG AATCCGGAGG AATTACCCAG CATATCGGAG CCTATGAGGT GACCCTCGAT AATGGCCGCA GCATTACGTT TCTCGATACG CCGGGCCATG AAGCCTTTAC CGCCATGCGT GCCCGCGGTG CGCAGGTGAC CGATATCGTT ATTCTTGTTG TCGCTGCCGA TGACAGTGTT ATGCCGCAGA CTATCGAGGC AATCAACCAC TCCAAGGCGG CCAATGTGCC TATTGTTGTC GCGATAAACA AGATCGACAA GCCTGAAGCA AATCCTGAAA AAATACGGGC TCAGCTTTCA GAAGCAGGCG TGCTGGTCGA GGACTGGGGC GGAGAGTACC AGTGCCAGGA GATTTCAGCC AAGCAGGGCA TGGGTATGCA TGAGTTGATG GAAAAGGTCC TTATGGAAGC TGAAATCAGA GAGCTGAAAG CCAATTTCTC GCGGGAAGCA AACTCGAGGG GTATCATTGT TGAATCAGAG CTCGATAAAG GGAAGGGCGT TATCTCTACC GTGCTTGTCC AGCGCGGTTT TCTCAAAGTC GGAGATCCAT TTGTGGCAGG CAACACCATG GGGCGTGTTC GAGCACTGAT GGATGAACGG GGCCGCCGCA TCAAGGAAGC CGGGCCTTCA CAGCCGGTAC GAGTGCTTGG TTTCGAAGAC CTTCCACAGT CGGGTGATGA ATTTGTTGTT ATGCCTACCG ACAAGGAGGC AAGGGAGATC GCCCAGAAAC GTCAGATTAT TCGTCGCGAG CATGAGTTCA GGCGTAGTAC GCGCGTCAAG CTCGACAGTA TCGCCCGCCA GATCAAGGAG GGGCTGATGA AGGAATTGAG CGTTATTATC AAGGCCGATA CAGATGGTTC GATTCAGGCC CTGGCTGACG GCTTGATGAA AATCCACAAC GAAGAGGTCA AAGTACAGAT CATTCACCAG GGGGTCGGCC AGATTACCGA GACTGACGTT CTTCTTGCGG CTGCATCGGA TGCTATTATT ATCGGTTTCC GTGTGCGACC GAACGTGAAC GCCAAGAGAC TTGCTGAAAA AGAGGATCTT GACGTCCGTT TTTACAGCGT GATCTATCAT GTGATCGAGG AGATCGAACA GGCGCTCGAG GGGATGTTGT CACCGGAGCT TCATGAGGAG AGTCTTGGCT CTCTCGAGAT CCGTCAGGTC TTCAGGGTTC CGAAAATCGG GAATGTCGGT GGTTGTTACA TGCTTGAGGG TAAGATTTTC CGCGATTCCA AGGTTCGTCT CCTTCGCGAA GGCGTTCAGA TCTATGATGG TGTTCTTGAT TCCCTCAAAC GCTTCAAGGA TGATGTCAAG GAAGTTGACG CCGGTTACGA GTGCGGCCTT AACCTGAAGG GGTACGGGGA TATCAAGGTT GGTGATATTG TCGAAGCCTA TCGGATAGTA GAGAAAAAAC GCAAACTTTG A
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Protein sequence | MSLEEKEMKY RISDIARELQ VSPQEVLHFV KQEGAKVAST SSMVKSDMRE LILGHFSDEK RLVDQTRKIR EEKRQRLTRL EEQSRKTYEK EQQLKDSIAV FPEPGPVLKK DHVHEEPEKP AIVISESEPE VEPEVEPEQP AAAQEAEEAV PTEAVSVPEP VEQERVVPAP EKPEAEKPVP EQSSTMKAQA SPEMQVTYEK PKNIGGLTVL GSIDVRSALD RGSESDRKKK NRKKRFKEQA DELKGEFENA GKAEGDKKPA KSGEAKTKAP KKAAGTTGSA AEDTTSSKKK KGGKKKKPAV DEKVISQNIR STISGMDDSS GGSGSRQKFR KMRKIEREKE LEAAEAVKEA ERSIVRVTEF ATAHELADLM GITAKEIIQR CFTLGKFVTI NQRLDKETIE LVALEFGFEA EFVSEVEATE VFEVHDDSED LEIRPPVVTI MGHVDHGKTS LLDYIRSSNV VAGESGGITQ HIGAYEVTLD NGRSITFLDT PGHEAFTAMR ARGAQVTDIV ILVVAADDSV MPQTIEAINH SKAANVPIVV AINKIDKPEA NPEKIRAQLS EAGVLVEDWG GEYQCQEISA KQGMGMHELM EKVLMEAEIR ELKANFSREA NSRGIIVESE LDKGKGVIST VLVQRGFLKV GDPFVAGNTM GRVRALMDER GRRIKEAGPS QPVRVLGFED LPQSGDEFVV MPTDKEAREI AQKRQIIRRE HEFRRSTRVK LDSIARQIKE GLMKELSVII KADTDGSIQA LADGLMKIHN EEVKVQIIHQ GVGQITETDV LLAAASDAII IGFRVRPNVN AKRLAEKEDL DVRFYSVIYH VIEEIEQALE GMLSPELHEE SLGSLEIRQV FRVPKIGNVG GCYMLEGKIF RDSKVRLLRE GVQIYDGVLD SLKRFKDDVK EVDAGYECGL NLKGYGDIKV GDIVEAYRIV EKKRKL
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