Gene Paes_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0343 
Symbol 
ID6460443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp377216 
End bp378121 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content51% 
IMG OID642724341 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_002015047 
Protein GI194333187 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.725626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAG GTAAGACTTT ACAGCAACGC ATTCAAGAGC GGTCCGTCTT TTTGCTTTTC 
AGTTTTCTGG GGACTGTCAC CAGAATGCTC AGTCGTGATT TTTTCGAACG GCTTGCCTGT
GTGATCGGAG ATATTGTCTA CGATGTACTG AGGATACGGC GATCTCTGGT TGAGCGAAAT
CTTTCGCAGA CCTTTCCATT AAAAAGCGCT CGTGAAATCA GCGTCATAGC TCGCAAGGTC
TACCGAAATG TTGTTATCAG TCTGCTTGAA GTGTTTCGTA TTCCTATGAT TGACGGCCGT
AACGGGGCGG AAAAACTTAT TGATGCAGAT CTTGATGAGT TTCTGTCGGC AACGCGCGAT
CAAGGCAGGG GAGGCGTTAT AATTTCGGCT CATTTCGGTA ACTGGGAGCT GACTGGTGTG
TGTGTCGGGT TGCTCGGTGC ACCGATGACT ATTGTCGTCA AACGGCTCAG GAATGCATTG
ATCGATCGTG AGATCAATGC TCTTCGCAGT TTTCACGGCA ACAGCGTCGT GTACAAAAAA
CAGGCCTTGC GCGAAGGTTT GCGTCTTCTT CAGGGGGGGG GGTATATAAC CATGCTTGCC
GATCAGTCCG ATCCTAAAGG CGGTTTTGTC ATGCCGTTTC TGGGTCGTCC GGCATCGGTT
TTTCTCGGCC CTGCTTTTCT TGCCCTGAAA GCAGGCGTAC CGGTTTTTCT TGGTATGACC
CGGCGTCAGG AGAGCGGCCG ATACCTGCTG GAGGCCAGAG AAATACCCAC ATCAGATCTC
TCTTTCGGCA AGGCTGGGAT TCAGGAACTT GCCCGCCGTT ATACTGAGGC AATAGAAGAG
TATATCTACC GCTATCCTGA AGAGTGGTTC TGGCTGCACG ACCGGTGGAA GCGGATTTCG
GGTTGA
 
Protein sequence
MASGKTLQQR IQERSVFLLF SFLGTVTRML SRDFFERLAC VIGDIVYDVL RIRRSLVERN 
LSQTFPLKSA REISVIARKV YRNVVISLLE VFRIPMIDGR NGAEKLIDAD LDEFLSATRD
QGRGGVIISA HFGNWELTGV CVGLLGAPMT IVVKRLRNAL IDREINALRS FHGNSVVYKK
QALREGLRLL QGGGYITMLA DQSDPKGGFV MPFLGRPASV FLGPAFLALK AGVPVFLGMT
RRQESGRYLL EAREIPTSDL SFGKAGIQEL ARRYTEAIEE YIYRYPEEWF WLHDRWKRIS
G