Gene Paes_0339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0339 
Symbol 
ID6460478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp369872 
End bp370501 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content48% 
IMG OID642724337 
Productphage SPO1 DNA polymerase-related protein 
Protein accessionYP_002015043 
Protein GI194333183 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCCA AGCTTTTTAA CGACATACCG CAGCAAACAC CGCAACGCGA CAGGAACGAC 
TACCACTCTC TCGACGAGCT TGGTGCCCAA TCAAAAAACT GCACACAATG CCAGCTTGCC
GAAACACGAC AGAACGTTGT CTTCGGTGAA GGAAATCCTC AGGCTAAAAT CGTTGTTATA
GGGGAAGGGC CAGGAGCTGA AGAGGATGCT CAGGGACGGC CTTTTGTAGG ACGTTCAGGA
AAACTGCTCG ATAAAATACT TCAATCCATA GGTTTTGACA GAAACGATGT TTATATCTGC
AACATAGTCA AGTGTCGGCC GCCCGCAAAC AGAAACCCCC TTGCAGAGGA AATAGAACAA
TGTCTTCCCT GGCTCAATGC ACAGCTCGAG CTGATTCAAC CGGGAATAAT TCTTCTTCTC
GGAAAAGTGG CAGCCAATAC TATACTGCAG AACAAGTGCT CCATGGGTTC CATGCGGGGA
AGCATTATAC GATGGGGAAC GTACGATGTG GTCGTCACCT ATCATCCGGC CGCACTACTG
AGAAACCCCA ACTGGAAATA CCAATGCTGG GAGGACGTCA AAATGCTGAG AAAACATTTT
GATTCAATGT ACCAAAGCAA TCAGCCCTGA
 
Protein sequence
MQAKLFNDIP QQTPQRDRND YHSLDELGAQ SKNCTQCQLA ETRQNVVFGE GNPQAKIVVI 
GEGPGAEEDA QGRPFVGRSG KLLDKILQSI GFDRNDVYIC NIVKCRPPAN RNPLAEEIEQ
CLPWLNAQLE LIQPGIILLL GKVAANTILQ NKCSMGSMRG SIIRWGTYDV VVTYHPAALL
RNPNWKYQCW EDVKMLRKHF DSMYQSNQP