Gene Paes_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0333 
Symbol 
ID6460574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp361803 
End bp362750 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content50% 
IMG OID642724331 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_002015037 
Protein GI194333177 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.87283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTT TTGACAAGCT GAAATTATCG CGGCTCAAGG ATGGGCTGAC AAAGACCCGT 
GAAACGATTC GTGACAATAT TTCCAGGCTC ACCCAGGGCA GAACAGAGAT AGACGAGGAG
TTTCTTGAGG AGCTTGAGAA CATCCTCATT GCAGCTGATG TCGGGGTTGA GACAACATTG
AGTATTGTTG ACCGGATTAC CGAAAGGGCA AAGGAAGAAA CATATCGTTC CGAGGATGAA
CTCAACAATA TGCTTCTGCA GGTTATGCAG GAAATGCTTC TTGATGCGTC TGAAGATCAT
CCTGTCGATT TCGATGCGTC ACTTCCGGCT AAGCCTTATG TTATTCTCAT TGTAGGCGTT
AATGGCGTTG GTAAGACGAC AAGCATCGCC AAGCTTGCCC ATAATTACCA TAAATCCGGA
AAGAAGGTGA TGATTGCGGC GGCTGACACG TTCAGGGCTG CTGCTGTGGA GCAGTTGCAG
ATCTGGGCTG ACAGGGCAGG GGTGCCGATG GTGAGCCAGG GGCAGGGAGC TGATCCTGCT
TCAGTGGTCT TCGATGCGGT CAGTTCAGCT GTTGCACGCG AGGCGGATGT TGTTCTCGTC
GATACCGCGG GGCGACTTCA TAACAAGGCG TATTTAATGG AGGAACTGGC CAAGATCATG
CGTGTCGCTA AAAAGAAGGT TCCCGAGGCG CCTCATGAGG TACTTCTCGT GCTTGACGGT
ACGACCGGTC AGAACGCTGT TTCTCAGGCC AGAGAGTTTA CAAAATGCGT CAATGTTACC
GGACTGATTA TTACGAAACT TGACGGCACG GCAAAAGGCG GCATTGTGTT GTCGATATCG
AGAGATCTTC ATCTTCCGGT CAAGTATATC GGTGTGGGTG AAAAGATTGA CGATCTTCAG
ATTTTCGACC GTTCGAAGTT TGTCGGTGCC CTGATGGGTA AGGCCTGA
 
Protein sequence
MGFFDKLKLS RLKDGLTKTR ETIRDNISRL TQGRTEIDEE FLEELENILI AADVGVETTL 
SIVDRITERA KEETYRSEDE LNNMLLQVMQ EMLLDASEDH PVDFDASLPA KPYVILIVGV
NGVGKTTSIA KLAHNYHKSG KKVMIAAADT FRAAAVEQLQ IWADRAGVPM VSQGQGADPA
SVVFDAVSSA VAREADVVLV DTAGRLHNKA YLMEELAKIM RVAKKKVPEA PHEVLLVLDG
TTGQNAVSQA REFTKCVNVT GLIITKLDGT AKGGIVLSIS RDLHLPVKYI GVGEKIDDLQ
IFDRSKFVGA LMGKA