| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_0331 |
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| Symbol | |
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| ID | 6460613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011059 |
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| Strand | - |
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| Start bp | 359025 |
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| End bp | 360389 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642724328 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_002015035 |
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| Protein GI | 194333175 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.869557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG AACCGACCAA GATCGTGTTA CGTGAGGATG AAATGCCCCG CCAATGGTAC
AATATCCAGG CAGACCTTCC TACGCCGTTA CCTCCCCCGC TCGGTCTGGA TGGCAGTCCT
ATCAAACCGG AAGATCTGGC GAGGGTCTTT CCAATGAACA TCATCGAACA GGAGGTCAGC
ACCGAACGAT GGATCACCAT TCCCGAACCG GTACAGGACA TTCTCAAACT CTGGCGACCA
TCTCCGCTCT ATCGCGCAAA ACGGCTCGAA AAAGCCCTTG GCACACCAGC AAAAATCTAT
TATAAAAACG AAGGGGTCTC ACCTGCCGGC AGTCATAAAC CCAATACAGC CATTGCCCAG
GCATACTACA ACAAAGAGTT CGGAATCAAA TACCTCACCA CGGAAACCGG CGCCGGACAG
TGGGGCAGCG CATTGGCGAT GAGCTGCAAA CTCATCGGCA TCGAATGCAA GGTATTCATG
GTACGAATCA GTTTTGACCA TAAGCCTTTC AGAAAAATCA TGATGAAAAC CTGGGGCGCA
GATTGTATCC CCAGTCCAAG CCCCATGACC AATATCGGAC GGAAAATTCT GGCCGAACAA
CCCGACACTC CAGGGAGCCT CGGCATCGCC ATCAGCGAAG CCATCGAACT GGCGGTCGAA
CGTGAAGATA CCCGCTATGC ACTCGGCAGC GTGCTGAACC ATGTCATGCT CCACCAAAGC
ATCATCGGAC TCGAAGCAAA AAAACAATTT GAAAAAATCA GCGCCTACCC CGATATCGTC
ATCGGATGCG CAGGAGGCGG GTCAAACTTT GCAGGCATAA GTTTTCCGTT TCTCTACGAC
AAAATTCACG GCAAGGATAT CCGGGTCATT GCAACCGAAC CGGAAGCATG CCCCACGCTG
ACCAGAGGCC CCTATGTCTA CGATGCCGGT GATGTCGCAA AAATGACGCC ACTGCTTGCC
ATGCACAGTC TTGGCCACGG CTTTATTCCT CCGGCCATTC ATGCCGGCGG CCTGCGTTAC
CATGGCATGG CCCCGCTGGT AAGCCATGTC CTGCACAACG GCCTCATTGA AGCAACAGCA
TTACCGCAAA CAGAATGTTA CGAAGCGGCT CTCCTCTTCG CCCACACAGA AGGCTTTATT
CCTGCCCCGG AAACATCACA CGCCATAGCA CAGACGATTC GGGAAGCCCG ACATGCAAAG
GAGGAGGGAA AAGAGAAGGT CATTCTGATG AACTGGTCCG GGCATGGGCT GATGGACCTG
CAGGGCTACG ATGCGTATAT GTCGGGAAAA CTGGAGGATT ATCCGCTGCC GGAAGAACTG
CTCAAACAGT CGCTTGCCGC AATCAAGGAT CATCCAAAAC CGTGA
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| Protein sequence | MNQEPTKIVL REDEMPRQWY NIQADLPTPL PPPLGLDGSP IKPEDLARVF PMNIIEQEVS
TERWITIPEP VQDILKLWRP SPLYRAKRLE KALGTPAKIY YKNEGVSPAG SHKPNTAIAQ
AYYNKEFGIK YLTTETGAGQ WGSALAMSCK LIGIECKVFM VRISFDHKPF RKIMMKTWGA
DCIPSPSPMT NIGRKILAEQ PDTPGSLGIA ISEAIELAVE REDTRYALGS VLNHVMLHQS
IIGLEAKKQF EKISAYPDIV IGCAGGGSNF AGISFPFLYD KIHGKDIRVI ATEPEACPTL
TRGPYVYDAG DVAKMTPLLA MHSLGHGFIP PAIHAGGLRY HGMAPLVSHV LHNGLIEATA
LPQTECYEAA LLFAHTEGFI PAPETSHAIA QTIREARHAK EEGKEKVILM NWSGHGLMDL
QGYDAYMSGK LEDYPLPEEL LKQSLAAIKD HPKP
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