Gene Paes_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0330 
Symbol 
ID6460620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp356332 
End bp358881 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content48% 
IMG OID642724327 
ProductATPase AAA-2 domain protein 
Protein accessionYP_002015034 
Protein GI194333174 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.711717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGGAA ATTTTTCAAA TAGAGTACAG GATGTCATAC GTCTTAGCAG GGAGGAGGCT 
CTCAGACTGG GACACGACTA TATAGGTACC GAGCATTTTC TCCTCGGATT GATCAAGGAG
GGTGAAGGTA TCGCTGCCCG AATTCTGAGA AATCTCAGCA TCGATCTTTT CAAGCTCAAA
GAGAAAATAG AGGAGAGCAC CCAGCAGAAA ATCGCTTCGG CACAGATGGG TAACGTTCCT
TTGACAAAGC AGGCTGAAAA GGTTCTGAAA ATAACCTATC TCGAAGCAAA GATCTGTAAG
TCCAATATCA TCGGCACAGA GCATCTGCTG CTGTCGATCC TTAAGGGTGA GGATAATATC
GCAGCCCAGA TTCTTGAGCA GTTCGGCGTG ACCTACGATA CGGTTAAAGA TGAATTGGTG
ACGATAACCG GGGGAAAGAG TGAATCGGGA GATCCTTCTA TGGAAGGCGC TTTTTCGGGC
GGTTCGGAAC GATCTCAGAA GAAAGCCGAT CCGAAAAAAG GAGAACGCAC CAAAACTCCT
GTTCTTGATA ATTTCGGACG TGATATCACC CGGCTTGCGC TGGAGGATAA GCTCGATCCC
ATTATCGGCA GGGAGAAGGA GATTGAACGT GTCGCGCAGG TCCTCAGCCG GCGTAAGAAG
AATAATCCTG TCCTTATTGG TGAGCCGGGG GTGGGTAAGA CTGCTATTGC CGAAGGGCTT
GCCCTGAAAA TTGTTCAGCG TAAAGTTTCA AGGATTCTCT ACGATAAGAG GGTTGTCGCT
CTCGATCTTG CGGCTCTTGT TGCCGGTACG AAATACCGGG GCCAGTTTGA AGAGCGTATG
AAAGCGCTTA TGAACGAGCT TGAGCGTTCA CGTGATGTTA TTCTCTTTAT CGATGAGTTG
CATACGATTA TCGGAGCCGG CGGTGCATCG GGCTCTCTGG ATGCAAGCAA TATCTTCAAG
CCTGCGCTTG CCCGTGGCGA ACTGCAGTGT ATCGGTGCGA CCACGCTCGA CGAATATCGT
CAGTATATCG AAAAAGACGG CGCTCTGGAC CGTCGTTTTC AGAAGATTAT GGTTGAACCG
ACTTCGGTCG ATGAGACTAT TCAGATTCTC CACAATATCA AGAGCAAATA CGAGTCGCAT
CACCATGTGC ATTTCGACGA TAATGCTATC GAGAAAGCTG TTAAACTGGC TGAGCGTTAT
ATTACCGACC GTTATCTGCC CGATAAGGCT ATCGATGTTA TGGATGAGGC GGGAGCCCGA
GTGCACCTGA GCAATATTCA TGTGCCTCAG AATATTCTCG ATCTTGAAAA AGCTATCGAA
GAGGTCAAGG CGGAAAAAAA CAAGGTTGTG CGTATGCAGA ACTTTGAAGA AGCTGCCATG
CTGCGCGACA AGGAAAAGAA TCTTCTTGAT TCGCTCGAAG ATGCCAAGCA GGAGTGGGAG
GAGCAGGCGG CTGAAACCGT TTACGATGTA ACGGAGACTG ATATCTCTTC GGTGGTCGCG
ATGATGACCG GTATCCCTGT TGTCAAGGTT GCACAGTCCG AATCACAGAA GCTGCTTAAC
ATGGAAGATG CCCTCAGGAA AGAGGTTATC GGCCAGGATG AGGCTATCAG GAAGATCACA
AAGGCGATTC AGCGTACCAG GGCCGGCCTT AAGGATCCGA TGCGCCCTAT CGGTTCGTTT
ATTTTCCTCG GGCCTACTGG TGTCGGTAAG ACTGAACTGG CAAAGGCGTT GACCAGGTAT
CTGTTCGATA GTGAGGACGC GCTCATTCGT GCAGATATGA GTGAGTATAT GGAGAAATTT
TCGGTAAGCA GACTTGTTGG AGCTCCTCCC GGATATGTCG GTTATGAAGA GGGAGGACAG
TTGACAGAGA AAGTACGTCG TAAGCCCTAT TCTGTTGTAC TGATCGACGA GATAGAAAAA
GCTCATCCGG ATGTTTTCAA TATTCTTCTT CAGGTCCTTG ACGAAGGGGT GTTGACCGAT
GGTCTCGGCC GGAAAGTCGA TTTCCGAAAT ACGATTATTA TCATGACCTC CAATATCGGA
GCCAAGGATA TCAAGAGCAT CGGTGCAGGG ATGGGCTTTT CTCCCGGAGA TGGCGGCGAC
AGCAGTTATA AATCGATGAA GTCAACGGTC GAGGATGCTT TGAAGAGAGT CTTTAATCCG
GAGTTCCTGA ACCGTATCGA TGATACGATC GTTTTCCATC AGCTTGAAAA GAAACATATC
TTTGATATTA TCGATATTAC TTCCGGCAAA CTCTTCAAGC GTCTCCATGA GATGGGTATC
GATGTCGAAA TTGAAGAGAA AGCCAAGGAG TTCCTTGTCG ATAAAGGCTA TGACCAGAAG
TTCGGAGCCA GACCGCTGAA GCGTGCCTTG CAGCGTTATG TTGAGGATCC TCTGGCTGAA
GAGATGCTCA AAGGCAAGTT TTCCGAGGGA AGCAGGATCA AGATCACCTT TGATGAAAAG
TCGGGTGAAC TGAAGTTTAA AAACGCTCGA AAAACAAAAC GTCAGGAGCC CCTTGACGAG
GAACTGACAG ACGGAAAACC CGGTAATTAA
 
Protein sequence
MEGNFSNRVQ DVIRLSREEA LRLGHDYIGT EHFLLGLIKE GEGIAARILR NLSIDLFKLK 
EKIEESTQQK IASAQMGNVP LTKQAEKVLK ITYLEAKICK SNIIGTEHLL LSILKGEDNI
AAQILEQFGV TYDTVKDELV TITGGKSESG DPSMEGAFSG GSERSQKKAD PKKGERTKTP
VLDNFGRDIT RLALEDKLDP IIGREKEIER VAQVLSRRKK NNPVLIGEPG VGKTAIAEGL
ALKIVQRKVS RILYDKRVVA LDLAALVAGT KYRGQFEERM KALMNELERS RDVILFIDEL
HTIIGAGGAS GSLDASNIFK PALARGELQC IGATTLDEYR QYIEKDGALD RRFQKIMVEP
TSVDETIQIL HNIKSKYESH HHVHFDDNAI EKAVKLAERY ITDRYLPDKA IDVMDEAGAR
VHLSNIHVPQ NILDLEKAIE EVKAEKNKVV RMQNFEEAAM LRDKEKNLLD SLEDAKQEWE
EQAAETVYDV TETDISSVVA MMTGIPVVKV AQSESQKLLN MEDALRKEVI GQDEAIRKIT
KAIQRTRAGL KDPMRPIGSF IFLGPTGVGK TELAKALTRY LFDSEDALIR ADMSEYMEKF
SVSRLVGAPP GYVGYEEGGQ LTEKVRRKPY SVVLIDEIEK AHPDVFNILL QVLDEGVLTD
GLGRKVDFRN TIIIMTSNIG AKDIKSIGAG MGFSPGDGGD SSYKSMKSTV EDALKRVFNP
EFLNRIDDTI VFHQLEKKHI FDIIDITSGK LFKRLHEMGI DVEIEEKAKE FLVDKGYDQK
FGARPLKRAL QRYVEDPLAE EMLKGKFSEG SRIKITFDEK SGELKFKNAR KTKRQEPLDE
ELTDGKPGN