Gene Paes_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_0320 
Symbol 
ID6458759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp346621 
End bp347880 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content54% 
IMG OID642724317 
Producthypothetical protein 
Protein accessionYP_002015024 
Protein GI194333164 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.354274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGC TTGAGAAATT AGAGGTTCTT GCCGGCTCAG CCAGATACGA TGCATCTTGC 
GCGTCGAGCG GAAGCACCCG GTCCGGCGGC AAGGCAAGCC TCGGTCATGC TTCTCAAGGT
GGAATCTGCC ACTCCTGGTC CGATGATGGC CGCTGTATTT CTCTCCTGAA AGTACTGTTG
TCCAACGATT GCTCATACGA CTGCGCCTAC TGTGTCAACC GGAGGTCGAA CCCTGTTCAG
CGTACCTCGT TCGAGGTGCA GGAACTGGTT GATCTGACCA TCAGCTTCTA TCGTCGAAAC
TACATCGAAG GGCTGTTTCT CAGTTCAGCC GTTTTGAAGA ACCCGGACCA TACCATGGAG
CGTTTGGTTG GTGTGGTGCG TAAGCTTCGC CAGGAGGAGC GTTTTGCCGG ATACATCCAT
ATGAAGGTTA TTCCCGGAAG CAGCCAGGAG CTTGTTGGCG AGGCGGGGTT GTTTGCCGAC
CGGGTAAGCG TCAATATTGA ACTGCCGTCG GGGAGCTCTC TGAACCTGCT TGCACCGCAG
AAAGATAAGC AGGCAATTCT TACACCCATG GCGTTTCTTG GTGAAACTAT CGGCAACAGC
CTGATGGAGA GACGCAAAAA CCCCAAAGCC CCCAGATTTT CGCCTGCCGG CCAGAGTACG
CAGATGATCA TAGGCGCAAG TCCTGAATCT GATCTGCAGA TTCTGCGGCT TTCCCAAGGG
CTCTACCGCA CCATGAATCT CAAGCGGGTC TATTATTCGG CATTTGTTCC GCTAACAAGC
GACAACCGTC TGCCGGTACT CGTAACCCCG CCTCTGCAGC GGGAGCATAG GCTTTATCAG
GCGGACTGGC TGTTACGCAA CTATGGGTTC AATGCCGAAG AAATTCTGTC TGACGATTAT
CCTTTTCTTG AAGAGCGCAT CGATCCGAAA GCCGCCTGGG CGCTTCGCCA TCCGGAGTTT
TTTCCCGTCG ATCTCAACAG GGCTGAGTAT GCCATGCTCC TCAGGGTCCC CGGAATCGGC
GTCACATCGG CCAGGCGCAT TGTTTCAGCC AGACGTTTTG CGGTGCTGAC GCCTGAAGGG
TTGAAAAAAA TCGGCGTGGT CATGAAACGG GCCAGATTTT TTATCGCCCT GTCCGGACGG
TCGGTCGAAA AGCTTCATGA CAGGCCTTCA CTGATTTTCC GGAAACTGCT TGCTGCTGAA
AACCAGCCGC AGAAAACCAC GATCAAGCAA CGCCAGCTCA CCCTTCCTGG ATTGGAATAA
 
Protein sequence
METLEKLEVL AGSARYDASC ASSGSTRSGG KASLGHASQG GICHSWSDDG RCISLLKVLL 
SNDCSYDCAY CVNRRSNPVQ RTSFEVQELV DLTISFYRRN YIEGLFLSSA VLKNPDHTME
RLVGVVRKLR QEERFAGYIH MKVIPGSSQE LVGEAGLFAD RVSVNIELPS GSSLNLLAPQ
KDKQAILTPM AFLGETIGNS LMERRKNPKA PRFSPAGQST QMIIGASPES DLQILRLSQG
LYRTMNLKRV YYSAFVPLTS DNRLPVLVTP PLQREHRLYQ ADWLLRNYGF NAEEILSDDY
PFLEERIDPK AAWALRHPEF FPVDLNRAEY AMLLRVPGIG VTSARRIVSA RRFAVLTPEG
LKKIGVVMKR ARFFIALSGR SVEKLHDRPS LIFRKLLAAE NQPQKTTIKQ RQLTLPGLE